DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm7 and MCM4

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_179236.3 Gene:MCM4 / 816142 AraportID:AT2G16440 Length:847 Species:Arabidopsis thaliana


Alignment Length:732 Identity:252/732 - (34%)
Similarity:387/732 - (52%) Gaps:100/732 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QD-RESIKTFLSEFCKC---DDDGKKEFVYGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVVD 68
            || :.:|:.|:..|.:.   .||..:|..|...:.|:...|...|.:|..|:.:::..|...:|.
plant   131 QDVKSAIEMFVKHFREARENSDDLFREGKYMVSIRKVIEIEGEWIDVDAFDVFDYDPDLYNKMVR 195

  Fly    69 NCRRYTSIFSDVIAELLPSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSELMKR 133
            ......:||..|:.:::.:..:       ..:.:::.|: ...||...|     ||..||:    
plant   196 YPLEVLAIFDIVLMDIVSTINR-------LFEKHVQVRI-FNLRTSTSM-----RNLNPSD---- 243

  Fly   134 FEVGFKPLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSETYQPV--- 195
                                   |.|:::::|::.|.:.:.|.:..|.:.|..||..: .|:   
plant   244 -----------------------IEKMISLKGMIIRSSSIIPEIREAVFRCLVCGYFS-DPIIVD 284

  Fly   196 -NSLSFTPVHDCPSDDCRVNKAGGRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIMCRG 259
             ..:|..|.  |...:|....:   :.|.....:|...|.|::||..|::|.|..|.:::::...
plant   285 RGKISEPPT--CLKQECMTKNS---MTLVHNRCRFADKQIVRLQETPDEIPEGGTPHTVSLLLHD 344

  Fly   260 EVTRMAQPGDHIVVSGVFLPL-MRTGFAQMIQGLLSETFLQAHRI-----ICINKNDEIS----- 313
            ::....:|||.|.|:|::..: :|.|.|......:.:|::....|     :.::..|.:.     
plant   345 KLVDNGKPGDRIEVTGIYRAMTVRVGPAHRTVKSVFKTYIDCLHIKKASKLRMSAEDPMDVDNSL 409

  Fly   314 ---DKDAELTPEEL---EELA-QDDFYERLATSLAPEIYGHLDVKKALLLLLVGG-VDKRPDGMK 370
               |:|.||..|:|   :||: |.|.||||:.||||.|:...||||.||..|.|| ......|..
plant   410 RRVDEDVELDEEKLRKFQELSKQPDIYERLSRSLAPNIWELDDVKKGLLCQLFGGNALNLASGAN 474

  Fly   371 IRGNINICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLTGEMTLEGGALV 435
            .||:|||.|:||||.:|||||.||.:|:.|..||:|||||.|||||.|.|||.|||..||.||||
plant   475 FRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVAKDPETGETVLESGALV 539

  Fly   436 LADQGVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAANPAFGRYNPRRT 500
            |:|:|:|||||||||:|..|:.:||||||||:|||||||:.:||||.|:||.|||:..|||||.:
plant   540 LSDRGICCIDEFDKMSDSARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLS 604

  Fly   501 VEQNIQLPAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSHSKQPPTRVKALDMNLMRRYINL 565
            |.:||.||..|||||||::||.||||...|.||||||..:|..:.: ..:.:|:|:..:..|::.
plant   605 VIENIHLPPTLLSRFDLIYLILDKPDEQTDRRLAKHIVALHFENAE-SAQEEAIDITTLTTYVSY 668

  Fly   566 CKRKN--PTIPDELTDYIVGAYVELRRE---ARNQKDMTFTSARNLLGILRLSTALARLRLSDSV 625
            . |||  |.:.||..:.:...|||||:.   |.:.|.:...:.|.:..::|||.||||:|.|:.|
plant   669 A-RKNIHPKLSDEAAEELTRGYVELRKAGKFAGSSKKVITATPRQIESLIRLSEALARMRFSEWV 732

  Fly   626 EKDDVAEALRLLEMSKDSLNQIHEHQKGHVP----NTS---------DRIFAIVRELA-----GS 672
            ||.||.||.|||.::..  ....:|..|.:.    ||.         |...:.:|::|     ..
plant   733 EKHDVDEAFRLLRVAMQ--QSATDHATGTIDMDLINTGVSASERMRRDTFASSIRDIALEKMQIG 795

  Fly   673 GKAVKISDIMDRCTTKG 689
            |.::::|::::.....|
plant   796 GSSMRLSELLEELKKHG 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 17/86 (20%)
MCM 145..641 CDD:214631 215/523 (41%)
MCM4NP_179236.3 PHA03307 <2..>76 CDD:223039
MCM_N 140..231 CDD:405270 17/98 (17%)
MCM 232..747 CDD:214631 221/554 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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