DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm7 and zmcm3

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001039231.1 Gene:zmcm3 / 734092 XenbaseID:XB-GENE-971646 Length:809 Species:Xenopus tropicalis


Alignment Length:702 Identity:231/702 - (32%)
Similarity:355/702 - (50%) Gaps:137/702 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RESIKTFLSEFCKCDDDGKKEFVYGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVVDNCRR-- 72
            ||:.:.:| :|.   ||.:.:.:|.|::..:....|..:.::::||.:.||..|..:::|...  
 Frog    15 REAQREYL-DFL---DDEEDQGIYQSKVRDMISENQYRLIVNVNDLRKKNEKRANMLMNNAFEGL 75

  Fly    73 --YTSIFSDVIAELLPSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSELMKRFE 135
              :.....|.:|.:..:|.:|                                       .:.|.
 Frog    76 IAFQRALKDFVASIDGTYAKQ---------------------------------------YEEFY 101

  Fly   136 VGFKPLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTC---DRCGSETYQPVNS 197
            :|.:.....|..:.|.:.::.:..:|.|.||||:|:.|:|.:|.:.:.|   .:.....|..:.|
 Frog   102 IGLEGSFGNKHVTPRTLTSRCLSCIVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIERKYTDLTS 166

  Fly   198 LSFTP---VHDCPSDDCRVNKAGGRLYLQTR-GSKFVK-FQEVKMQEHSDQVPVGHIPRSMTIMC 257
            |...|   |:  |:.|...|.      |:|. |....| .|.:.:||..::.|.|.:|||:.|:.
 Frog   167 LEAFPSSAVY--PTKDEENNP------LETEYGLSIYKDHQTITIQEMPEKAPAGQLPRSVDIIL 223

  Fly   258 RGEVTRMAQPGDHIVVSGVF--LPLMRTGFAQMIQGLLSETFLQAHRIICINKNDEISDKDAELT 320
            ..::....:|||.:.|.|.:  ||..:.|:.    .....|.|.|..:|.::|         |:|
 Frog   224 DDDLVDKVKPGDRVQVIGTYRCLPSKQNGYT----SASFRTILIACNVIQMSK---------EVT 275

  Fly   321 P----EELEELAQ------DDFYERLATSLAPEIYGHLDVKKALLLLLVGGVDKRPD-GMKIRGN 374
            |    ::|.::.:      .|.:|:|:.||||.|:|||.:|||:|.:|:|||:|..| |.:|||:
 Frog   276 PVFSADDLAKIKKFSKSHSKDIFEQLSRSLAPSIHGHLYIKKAILCMLLGGVEKVLDNGTRIRGD 340

  Fly   375 INICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLTGEMTLEGGALVLADQ 439
            ||:.|:|||.|||||||.|:...|.|:..|||||||||||||||..|..|||..||.||:||||:
 Frog   341 INVLLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADR 405

  Fly   440 GVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAANPAFGRYNPRRTVEQN 504
            ||.||||||||:|.|||||||||||..::||||||...||||.|:||||||.:|||:..:|...|
 Frog   406 GVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYKTPMDN 470

  Fly   505 IQLPAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSH-------------------------- 543
            |.|..:||||||||:::.|:.|.:.|..::.|:..:|.:                          
 Frog   471 IGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRYRAAGEQDGDAMPLGSAVDILATNDPN 535

  Fly   544 ---SKQPPTRV----------------KALDMNLMRRYINLCKRKNPTIPDELTDYIVGAYVELR 589
               .:|...:|                |.|.:..||:|:::.|...|.:..|...:|...|..||
 Frog   536 VTSEEQQELQVYEKHDSLLHGVKKRKEKILSVEFMRKYVHVAKIFKPVLTQEAASFIAEEYSRLR 600

  Fly   590 REARNQKDMTFTS---ARNLLGILRLSTALARLRLSDSVEKDDVAEALRLLE 638
            .:.:...|:..||   ||.|..::|||||.|::|:|.:|:..|...|:.|::
 Frog   601 NQDQLSTDVARTSPVTARTLETLIRLSTAHAKVRMSKTVQLQDAEAAIELVQ 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 17/87 (20%)
MCM 145..641 CDD:214631 210/563 (37%)
zmcm3NP_001039231.1 MCM_N 21..106 CDD:379644 19/127 (15%)
MCM 111..656 CDD:214631 210/563 (37%)
Arginine finger 479..482 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..741
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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