DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm7 and mcm6

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001016221.1 Gene:mcm6 / 548975 XenbaseID:XB-GENE-5870537 Length:821 Species:Xenopus tropicalis


Alignment Length:679 Identity:229/679 - (33%)
Similarity:343/679 - (50%) Gaps:103/679 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KTFLS--EFCKCDDDGKKEFVYGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVVDNCRRYTSI 76
            |.||.  |.||..|...   :|.|...:|...|:..:.::..|:..:|:.||..:          
 Frog    29 KLFLEFLEECKGKDGSN---LYVSAAEELVRPERNTLVVNFTDIEYYNQQLATTI---------- 80

  Fly    77 FSDVIAELLPSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSELMKRFEVGFKPL 141
                         |:|.:.     ||......:.|..|       :..:.|:.  |.|.|.|...
 Frog    81 -------------QEEYYR-----VYPHLCRAVRSFAR-------QMGNIPAN--KEFYVAFSDF 118

  Fly   142 STEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSETYQPVNSLSFTPVHDC 206
            ...:  .|||:.:..||.|:.:.|.|.|...|.|.:|..|:.|..|.|..........:|....|
 Frog   119 PARQ--KIRELSSAKIGTLLRISGQVVRTHPVHPELVSGTFLCMDCQSVVKDVEQQFRYTQPTIC 181

  Fly   207 PSDDCRVNKAGGRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIMCRGEVTRMAQPGDHI 271
            .:..|...:   |..|.|..|:||.||:|::||...::|.|.||||:.|:.|.|....|..||..
 Frog   182 KNPVCANRR---RFTLDTNKSRFVDFQKVRIQETQAELPRGAIPRSVEIILRAEAVETAMAGDRC 243

  Fly   272 VVSGVFLPL------------MRTGF---------AQMIQGL-------LSE--TFLQAHRIICI 306
            ..:|..:.:            |.||.         ::.:|||       ||.  .||..| :...
 Frog   244 DFTGTLIVVPDISALAAGDARMETGAKVTGGEGFNSEGVQGLKALGVRDLSYRLAFLACH-VGAT 307

  Fly   307 N-----KNDEISDKDAE-----LTPEELE---ELAQD-DFYERLATSLAPEIYGHLDVKKALLLL 357
            |     |:....|:.||     :|.:|.|   |::|| :.|..|.|||.|.|:|:.::|:.:||:
 Frog   308 NPRFGGKDLREEDQTAESIKNQMTVQEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEIKRGVLLM 372

  Fly   358 LVGGVDKRP-DGMKIRGNINICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKD 421
            |.|||.|.. :|..:||:||:|::|||..:|||.|.::...:.|:.||:|:.||..||||||:||
 Frog   373 LFGGVPKTTMEGTSLRGDINVCIVGDPSTSKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVKD 437

  Fly   422 PLTGEMTLEGGALVLADQGVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILA 486
            ..:.|..:|.|||:|||.|||||||||||..:|:.||||.||||||||.|||:..|||||.||||
 Frog   438 EESHEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLNARTSILA 502

  Fly   487 AANPAFGRYNPRRTVEQNIQLPAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSHSKQPPTRV 551
            ||||..|||...::::.|:.|.|.::|||||.:::.|:.:...|..:|:.|..:|:.:::...||
 Frog   503 AANPVGGRYERSKSLKHNVNLSAPIMSRFDLFFILVDECNEVTDYAIARRIVDLHARNEESIERV 567

  Fly   552 KALDMNLMRRYINLCKRKNPTIPDELTDYIVGAYVELRRE-----ARNQKDMTFTSARNLLGILR 611
            .:::.  ::||:...::..|.|..|..::||..|..||:.     |::...:|   .|.|..::|
 Frog   568 YSIED--IQRYLLFARQFQPKITKEAEEFIVEQYRRLRQRDGSGVAKSSWRIT---VRQLESLIR 627

  Fly   612 LSTALARLRLSDSVEKDDVAEALRLLEMS 640
            ||.::||:..||.|:...|.||.|||..|
 Frog   628 LSESMARMHCSDEVQPKHVKEAFRLLSKS 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 17/84 (20%)
MCM 145..641 CDD:214631 203/546 (37%)
mcm6NP_001016221.1 MCM_N 31..117 CDD:379644 25/125 (20%)
MCM 123..658 CDD:214631 203/543 (37%)
Arginine finger 529..532 2/2 (100%)
MCM6_C 710..819 CDD:375690
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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