DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm7 and mcm4

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001005655.1 Gene:mcm4 / 448137 XenbaseID:XB-GENE-1011481 Length:863 Species:Xenopus tropicalis


Alignment Length:733 Identity:238/733 - (32%)
Similarity:367/733 - (50%) Gaps:113/733 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RESIKTFLSEFCKCDDDGKKEFVYGSQL---VKLAHREQV------LITIDLDDLAEFNESLAEA 65
            :|..:.|:..|  .|...|:|...|..|   :.:...|::      .:.:|.|.|..|::.|...
 Frog   163 KEKFQRFVQRF--IDPLAKEEENVGLDLNEPIYMQRLEEINVVGEPFLNVDCDHLRSFDQDLYRQ 225

  Fly    66 VVDNCRRYTSIFSDVIAELLPSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSEL 130
            :|  |  |..       |::|::...      |.:::.|.                    :|..:
 Frog   226 LV--C--YPQ-------EVIPTFDMA------ANEIFFER--------------------YPDSI 253

  Fly   131 MKRFEVGFKPLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSETYQPV 195
            ::. ::..:|.:..|..::|.:..:.|.:|:|:.|:|.|.:::.|.|..|.:.|..|...|...:
 Frog   254 LEH-QIQVRPYNALKTRNMRSLNPEDIDQLITISGMVIRTSQIIPEMQEAFFKCQVCAFTTRVEI 317

  Fly   196 NSLSFTPVHDCPSDDCRVNKAGGRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIMCRGE 260
            :....:.    ||.....|.......:..| |.|...|.:|:||..:.:|.|..|.:..:....:
 Frog   318 DRGRISE----PSVCKHCNTTHSMALIHNR-SMFSDKQMIKLQESPEDMPAGQTPHTTILYGHND 377

  Fly   261 VTRMAQPGDHIVVSGVF--LPLMRTGFAQMIQGLLSETFLQAHRIICINKNDEIS----DKDAE- 318
            :....||||.:.|:|::  :|:......:.::.:. :|.:.   :|...|.|...    |:|.| 
 Frog   378 LVDKVQPGDRVNVTGIYRAVPIRVNPRVRNVKSVY-KTHID---VIHYRKTDAKRLHGIDEDTEQ 438

  Fly   319 --LTPEE---LEEL-AQDDFYERLATSLAPEIYGHLDVKKALLLLLVGGVDK---RPDGMKIRGN 374
              .|.|.   |:|| |:.|.|||||::|||.||.|.|:||.:||.|.||..|   .....|.|..
 Frog   439 KMFTEERVAMLKELAAKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAE 503

  Fly   375 INICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLTGEMTLEGGALVLADQ 439
            :||.|.||||.:|||||.|:..|..|.|||:|:|||.|||||.|||||.|.::.|:.|||||:|.
 Frog   504 VNILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN 568

  Fly   440 GVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAANPAFGRYNPRRTVEQN 504
            |:|||||||||.:..|:.:||||||||:|||||||:..||||.|:||||||...::||::|..:|
 Frog   569 GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPVESQWNPKKTTIEN 633

  Fly   505 IQLPAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSHSKQPPTRVKALDMNLMRRYINLCKR- 568
            ||||..|||||||::|:.|..|...|.|||.|:..::..|:: ..:.:.|||.:::.||...:. 
 Frog   634 IQLPHTLLSRFDLIFLMLDPQDETYDRRLAHHLVALYYQSEE-QMKEEHLDMAVLKDYIAYARTY 697

  Fly   569 KNPTIPDELTDYIVGAYVELRREARNQKDMTFTSARNLLGILRLSTALARLRLSDSVEKDDVAEA 633
            .||.:.:|.:..::.|||::|: ..:.:.|.....|.|..::|||.|.|::|.|..||..||.||
 Frog   698 VNPRLGEEASQALIEAYVDMRK-IGSGRGMVSAYPRQLESLIRLSEAHAKVRFSSKVETIDVEEA 761

  Fly   634 LRL----LEMS-------------------------KDSLNQIHE---HQKGHVPNTS-DRIFAI 665
            .||    |:.|                         |:.|.|:.:   ..||..|... .::|  
 Frog   762 KRLHREALKQSATDPRTGIVDISILTTGMSATARKRKEELAQVLKKLIQSKGKTPALKYQQLF-- 824

  Fly   666 VRELAGSGKAVKISDIMD 683
             .:|.|...|....|:.|
 Frog   825 -EDLRGQSDAAVTKDMFD 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 18/92 (20%)
MCM 145..641 CDD:214631 203/541 (38%)
mcm4NP_001005655.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..121
PHA03307 <3..>122 CDD:223039
MCM_N 166..264 CDD:379644 22/137 (16%)
MCM 267..770 CDD:214631 201/513 (39%)
Arginine finger 642..645 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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