DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm7 and Mcm4

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_387500.1 Gene:Mcm4 / 29728 RGDID:3060 Length:862 Species:Rattus norvegicus


Alignment Length:678 Identity:226/678 - (33%)
Similarity:344/678 - (50%) Gaps:110/678 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ITIDL-------DDLAEFNESLAEAVV------------DNCRRYTSIFSDVIAE---------L 84
            :.:||       :|.....:||.:.:|            ::.:|:...|:|.:|:         .
  Rat   124 LQVDLQSDGAAAEDTVASEQSLGQKLVIWGTDVNVATCKEHFQRFLQCFTDPLAKEEENVGIDIT 188

  Fly    85 LPSYKQQ----EVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSELMKRF----------- 134
            .|.|.|:    .:..:..|:|..||   ::|..:|...|   ..|:|.|::..|           
  Rat   189 QPLYMQRLGEINITGEPFLNVNCEH---IKSFGKNLYRQ---LISYPQEVIPTFDMAVNEIFFDR 247

  Fly   135 --------EVGFKPLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSET 191
                    ::..:|.:..|..|:|.:..:.|.:|:|:.|:|.|.:::.|.|..|.:.|..|...|
  Rat   248 YPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTT 312

  Fly   192 YQPVNSLSFTPVHDCPSDDCRVNKAGGRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIM 256
            ...::....  ...|....|....:   :.|....|.|...|.:|:||..:.:|.|..|.::.:.
  Rat   313 RVEMDRGRI--AEPCTCVHCHTTHS---MALIHNRSLFSDKQMIKLQESPEDMPAGQTPHTVVLF 372

  Fly   257 CRGEVTRMAQPGDHIVVSGVF--LPL---------------------MRTGFAQMIQGLLSETFL 298
            ...::....||||.:.|:|::  :|:                     .|...|:.:.||..|.  
  Rat   373 AHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEA-- 435

  Fly   299 QAHRIICINKNDEISDKDAELTPEELEELA-QDDFYERLATSLAPEIYGHLDVKKALLLLLVGGV 362
                     :....|:|..:|    |:||: :.|.|||||::|||.||.|.|:||.:||.|.||.
  Rat   436 ---------EQKLFSEKRVKL----LKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGT 487

  Fly   363 DK---RPDGMKIRGNINICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLT 424
            .|   .....|.|..|||.|.||||.:|||||.|:..|..|.|||:|:|||.|||||.|||||.|
  Rat   488 RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET 552

  Fly   425 GEMTLEGGALVLADQGVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAAN 489
            .::.|:.|||||:|.|:|||||||||.:..|:.:||||||||:|||||||:..||||.|:|||||
  Rat   553 RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAAN 617

  Fly   490 PAFGRYNPRRTVEQNIQLPAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSHSKQPPTRVKAL 554
            |...::||::|..:|||||..|||||||::|:.|..|...|.|||.|:..::..|:: ....:.|
  Rat   618 PIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEE-QVEQEFL 681

  Fly   555 DMNLMRRYINLCKRK-NPTIPDELTDYIVGAYVELRREARNQKDMTFTSARNLLGILRLSTALAR 618
            ||.:::.||...... .|.:.:|.:..::.|||.:|: ..:.:.|.....|.|..::||:.|.|:
  Rat   682 DMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRK-IGSSRGMVSAYPRQLESLIRLAEAHAK 745

  Fly   619 LRLSDSVEKDDVAEALRLLEMSKDSLNQ 646
            :|.||.||..||.||.||   .:::|.|
  Rat   746 VRFSDKVEAIDVEEAKRL---HREALKQ 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 13/80 (16%)
MCM 145..641 CDD:214631 199/523 (38%)
Mcm4NP_387500.1 MCM_N 165..286 CDD:291233 25/126 (20%)
MCM 266..769 CDD:214631 199/527 (38%)
P-loop_NTPase 504..643 CDD:304359 88/138 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.