DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm7 and Mcm6

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_058983.1 Gene:Mcm6 / 29685 RGDID:61967 Length:821 Species:Rattus norvegicus


Alignment Length:734 Identity:243/734 - (33%)
Similarity:359/734 - (48%) Gaps:140/734 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FLSEFCKCDDDGKKEFV-YGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVVDN--------CR 71
            ||.||  ...||:.::: :..:|::   .|:..:.:...||.:||:.|:..:.:.        ||
  Rat    33 FLEEF--QGSDGEIKYLQFAEELIR---PERNTLVVSFADLEQFNQQLSTTIQEEFYRVYPYLCR 92

  Fly    72 RYTSIFSDVIAELLPSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSELMKRFEV 136
                                      ||..:::                 :|...|  ..|.|.|
  Rat    93 --------------------------ALKTFVK-----------------DRKEIP--FAKDFYV 112

  Fly   137 GFKPLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSETYQPVNSLSFT 201
            .|:.|.|.  |.|||:.:..||.|..:.|.|.|...|.|.:|..|:.|..|.:..........:|
  Rat   113 AFQDLPTR--HKIRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQTVIKDVEQQFKYT 175

  Fly   202 PVHDCPSDDCRVNKAGGRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIMCRGEVTRMAQ 266
            ....|.:..|...|   |..|.|..|:||.||:|::||...::|.|.||||:.::.|.|....||
  Rat   176 QPSICRNPVCANRK---RFLLDTNKSRFVDFQKVRIQETQAELPRGSIPRSLEVVLRAEAVESAQ 237

  Fly   267 PGDHIVVSGVFL----------PLMRT----------GF-AQMIQGL--LSETFLQAHRIICI-- 306
            .||....:|..:          |..|.          |: .:.|:||  |....| ::|::.:  
  Rat   238 AGDRCDFTGTLIVVPDVSKLSTPGARAETNSRVSGADGYETEGIRGLRALGVRDL-SYRLVFLAC 301

  Fly   307 ---NKNDEISDK---DAELTPEELE------------ELAQD-DFYERLATSLAPEIYGHLDVKK 352
               ..|.....|   |.|.|.|.::            |::|| :.|..|.|||.|.|:|:.:||:
  Rat   302 YVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKR 366

  Fly   353 ALLLLLVGGVDKRP-DGMKIRGNINICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTA 416
            .:||:|.|||.|.. :|..:||:||:|::|||..||||.|.::...:.|:.||:|:.||..||||
  Rat   367 GVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPSTAKSQFLKHVDEFSPRAVYTSGKASSAAGLTA 431

  Fly   417 AVMKDPLTGEMTLEGGALVLADQGVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNAR 481
            ||::|..:.|..:|.|||:|||.|||||||||||..:|:.||||.||||||||.|||:..|||||
  Rat   432 AVVRDEESHEFVIEAGALMLADNGVCCIDEFDKMDMRDQVAIHEAMEQQTISITKAGVKATLNAR 496

  Fly   482 VSILAAANPAFGRYNPRRTVEQNIQLPAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSHSKQ 546
            .||||||||..|.|:..::::|||.|.|.::|||||.:::.|:.:...|..:|:.|..:||..::
  Rat   497 TSILAAANPVSGHYDRSKSLKQNINLSAPIMSRFDLFFILVDECNEVTDYAIARRIVDLHSRIEE 561

  Fly   547 PPTRVKALDMNLMRRYINLCKRKNPTIPDELTDYIVGAYVELRREARNQKDMTFTS----ARNLL 607
            ...||.:||.  :|||:...::..|.|..|..|:||..|..||:  |:...:|.:|    .|.|.
  Rat   562 SIDRVYSLDD--IRRYLLFARQFKPKISKESEDFIVEQYKRLRQ--RDGSGITKSSWRITVRQLE 622

  Fly   608 GILRLSTALARLRLSDSVEKDDVAEALRLL-------EMSKDSLNQIHEHQ----------KGHV 655
            .::|||.::||:...|.|:...|.||.|||       |....:|:|..|.|          .||.
  Rat   623 SMIRLSESMARMHCCDEVQPKHVKEAFRLLNKSIIRVETPDVNLDQEEEIQMETDEGPGGINGHA 687

  Fly   656 PNTSDRIFAIVRELAGSGK 674
            .:.     |.|....|||:
  Rat   688 DSP-----APVNGFNGSGE 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 15/89 (17%)
MCM 145..641 CDD:214631 207/551 (38%)
Mcm6NP_058983.1 MCM_N 27..114 CDD:405270 22/130 (17%)
MCM 119..657 CDD:214631 207/547 (38%)
MCM6_C 711..817 CDD:408078
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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