DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm7 and mcm3

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_587795.1 Gene:mcm3 / 2538838 PomBaseID:SPCC1682.02c Length:879 Species:Schizosaccharomyces pombe


Alignment Length:704 Identity:231/704 - (32%)
Similarity:359/704 - (50%) Gaps:124/704 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RESIKTFLSEFCKCDDDGKKEFVYGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVVDNCRRYT 74
            ::.::.| .|:.:.|.|.....:|...::::.:..|..:.:::|:|.::|..||:.|:.....|.
pombe    11 KDRVRIF-QEYLEHDTDDANVTLYQEAILRMLNMGQRRLIVNIDELRDYNRELADGVLLKPLEYV 74

  Fly    75 SIFSDVIAELLPSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSFPSELMKRFEVGFK 139
            ..|.:.:..::.:.....|| ||..|                               |.|.|||:
pombe    75 EPFDEALRNVVSTLIDPVVH-KDLKD-------------------------------KLFYVGFR 107

  Fly   140 PLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSETYQPV------NSL 198
            ....:...:.|.::|.|:.|::::.||||||:.|:|.::.:.:.|:......::..      ..|
pombe   108 GSFGDHHVNPRTLRAMHLNKMISLEGIVTRCSFVRPKVIKSVHYCEATKRHHFKQYADATMNGGL 172

  Fly   199 SF-TPVHDCPSDDCRVNKAGGRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIMCRGEVT 262
            || :.|:  |:.|    :.|..|.::...|.|...|.:.:||..::.|.|.:|||:.|:...::.
pombe   173 SFQSTVY--PTQD----ENGNPLSIEFGFSTFRDHQSISLQEMPERAPPGQLPRSIDILLDDDLV 231

  Fly   263 RMAQPGDHIVVSGVFLPLMRTGFAQMIQGLLSETF---LQAHRIICINKND----------EISD 314
            ...:|||.:.:.|.:     ........|..|.||   |.|:.::.:....          :|:|
pombe   232 DTVKPGDRVNIVGQY-----RSMGSKTSGNTSATFRTVLLANNVVLLGNKPGLGNVGGGALDITD 291

  Fly   315 KDAELTPEELEELA-QDDFYERLATSLAPEIYGHLDVKKALLLLLVGGVDKR-PDGMKIRGNINI 377
            .|.    ..:.:|| :.:.:|.|:|||||.|||:..||:|:||||:||.:|. .:|..|||:|||
pombe   292 ADI----RNINKLARKKNVFELLSTSLAPSIYGYEYVKQAILLLLLGGTEKNLTNGTHIRGDINI 352

  Fly   378 CLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLTGEMTLEGGALVLADQGVC 442
            .::|||..||||||.::...|..:..|||||||||||||||..|..|||..||.||:||||:||.
pombe   353 LMVGDPSTAKSQLLRFVLNTAPLAIATTGRGSSGVGLTAAVTTDKETGERRLEAGAMVLADRGVV 417

  Fly   443 CIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAANPAFGRYNPRRTVEQNIQL 507
            ||||||||:|.||.||||||||||::||||||.|:||||.|::|||||.:|:|:.|:...|||.|
pombe   418 CIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHTSLNARCSVIAAANPIYGQYDIRKDPHQNIAL 482

  Fly   508 PAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSH---SKQPPTRVK----------------- 552
            |.::|||||||:::.|..|...|..|::|:..:|.:   ..:|.|.|:                 
pombe   483 PDSMLSRFDLLFIVTDDIDDKKDRALSEHVLRMHRYLPPGVEPGTPVRDSLNSVLNVGATNAAGV 547

  Fly   553 -------------------------------ALDMNLMRRYINLCK-RKNPTIPDELTDYIVGAY 585
                                           .|::|.:|:||...| |.:|.:.....:||...|
pombe   548 STENVEQEVETPVWETFSSLLHANARTKKKELLNINFVRKYIQYAKSRIHPILNQATAEYITNIY 612

  Fly   586 VELRRE--ARNQKDMTFTSARNLLGILRLSTALARLRLSDSVEKDDVAEALRLL 637
            ..||.:  ..||:..:..:||.|..::|||||.|:.|||..||..|...|.::|
pombe   613 CGLRNDDLQGNQRRTSPLTARTLETLIRLSTAHAKARLSSVVEVKDAKAAEKIL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 16/83 (19%)
MCM 145..641 CDD:214631 207/569 (36%)
mcm3NP_587795.1 MCM_N 17..133 CDD:291233 28/148 (19%)
Mcm2 21..719 CDD:224162 229/693 (33%)
P-loop_NTPase <407..>465 CDD:304359 44/57 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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