DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm7 and mcm-3

DIOPT Version :9

Sequence 1:NP_523984.1 Gene:Mcm7 / 39014 FlyBaseID:FBgn0020633 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_506706.1 Gene:mcm-3 / 180010 WormBaseID:WBGene00003155 Length:812 Species:Caenorhabditis elegans


Alignment Length:718 Identity:238/718 - (33%)
Similarity:371/718 - (51%) Gaps:132/718 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RRDYAQDRESIKTFLSEFCKCDDDGKKEFVYGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVV 67
            |.:.|:.:|..:.:|:..    |:....|.|..::||:.:..:..:.::||::.|.....||.::
 Worm    12 RAEDARKQEITEQYLNFL----DNQADTFHYRQKIVKMMNDGESRLVMNLDEIREILPERAEGLL 72

  Fly    68 D------NCRRYTSIFSDVIAELLPSYKQQEVHAKDALDVYIEHRLMMESRTRNPMEQRDERNSF 126
            .      ||              |.|..|..::..|...|                         
 Worm    73 TQSVLEMNC--------------LQSALQMAINRSDVQAV------------------------- 98

  Fly   127 PSELMKRFEVGFKPLSTEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTC---DRCG 188
               :...|.|||:....|:..:.|.:|:.::|.||...||||:|:.|:..::.:.:.|   ::..
 Worm    99 ---VKTGFHVGFEGTFGERHVNPRTLKSSYLGNLVCCEGIVTKCSTVRQKLLTSVHYCPATNKVL 160

  Fly   189 SETYQPVNSLSFTPV--HDCPSDDCRVNKAGGRLYLQTR--GSKFVKFQEVKMQEHSDQVPVGHI 249
            .:.:.....|. |.|  ::.|::|...|.      |:|.  .|.:...|...:||..:..|.|.:
 Worm   161 EKKFADFTMLD-TAVTNNNYPTEDENKNP------LETEFGHSVYKDHQTFTIQELPESAPAGQL 218

  Fly   250 PRSMTIMCRGEVTRMAQPGDHIVVSGVF--LPLMRTGFAQMIQGLLSETFLQAHRIICINKNDEI 312
            ||::..:...::....:|||.:.:.|||  ||..:.|.:       |.:|   ..||.||....:
 Worm   219 PRAVDCVADLDLADRVKPGDRVRIIGVFRVLPNKQNGVS-------SGSF---RSIIIINHIQML 273

  Fly   313 SDKDA--ELTPEELEELAQ----DDFYERLATSLAPEIYGHLDVKKALLLLLVGGVDK-RPDGMK 370
            | |:.  ...|::::::.:    .:.:|.||.||||.|.||.:.|||||.||:||::| ..:|.:
 Worm   274 S-KEVIPNFEPQDVKDVRKISKSRNPFELLARSLAPSICGHEETKKALLCLLLGGMEKILNNGSR 337

  Fly   371 IRGNINICLMGDPGVAKSQLLGYISRLAVRSQYTTGRGSSGVGLTAAVMKDPLTGEMTLEGGALV 435
            :||:||:.|:|||.|||||||.|:.|:|.|:..|||||||||||||||..||.:||..||.||:|
 Worm   338 LRGDINVLLIGDPSVAKSQLLRYVLRMAPRAITTTGRGSSGVGLTAAVTTDPDSGERRLEAGAMV 402

  Fly   436 LADQGVCCIDEFDKMADQDRTAIHEVMEQQTISIAKAGIMTTLNARVSILAAANPAFGRYNPRRT 500
            |||:||.||||||||:|.|||||||||||..::|:||||...||||.|:||||||.:|||||.::
 Worm   403 LADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHAKLNARCSVLAAANPVYGRYNPFKS 467

  Fly   501 VEQNIQLPAALLSRFDLLWLIQDKPDRDNDLRLAKHITYVHSH---------------------- 543
            ..:||.:..:|||||||::::.|:.|.|.|..:|:|:..:|::                      
 Worm   468 PMENIGMQDSLLSRFDLIFVLLDEHDADKDANVAEHVLKLHTYRTQGEADGTVLPMGGGVETIST 532

  Fly   544 ----SKQPPTRV-------------KALDMNLMRRYINLCKRKNPTIPDELTDYIVGAYVELRRE 591
                :|:..:.:             |.|.|:.||:||:|.:...|.:.||.|:||...|.::|..
 Worm   533 INMETKKASSSIYEENTQWAGIQDTKILTMDFMRKYIHLARSVQPKLTDEATEYISEVYADIRSF 597

  Fly   592 ARNQKDMTFT---SARNLLGILRLSTALARLRLSDSVEKDDVAEALRLLEMS----KDSLNQIHE 649
            ...:.|...|   :||.|..::|||||:|:.|.|..||::|..:|..||..:    |....|.:|
 Worm   598 DITKTDQERTMPVTARQLETLIRLSTAIAKARFSKKVEREDTEKAYNLLHFACFKEKPKARQEYE 662

  Fly   650 HQK 652
            .:|
 Worm   663 KKK 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm7NP_523984.1 MCM_N 13..97 CDD:379644 16/89 (18%)
MCM 145..641 CDD:214631 208/557 (37%)
mcm-3NP_506706.1 MCM_N 25..109 CDD:379644 22/129 (17%)
MCM 114..649 CDD:214631 208/552 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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