DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and gpc1

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001072316.1 Gene:gpc1 / 779769 XenbaseID:XB-GENE-964661 Length:554 Species:Xenopus tropicalis


Alignment Length:593 Identity:151/593 - (25%)
Similarity:249/593 - (41%) Gaps:95/593 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GGSTHQCDAVKSYFESIDIKSSGT-----YSEKGAIC--GGNCCNNATELELRDKAAGMFEQLLH 120
            |..|..|..||..:.:.....:|.     ..|...||  |..||.:..|....:.:...||..|.
 Frog    26 GSKTKSCSEVKQVYLAKGFSLNGAPQSEISGEHLRICPQGYTCCTSEMEENFANISRVEFEAKLR 90

  Fly   121 HHTSSLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYT 185
            ..::|::.:|.|..:.|.|:..:|...||.:....|...|..:...:..:...||:|:..:.   
 Frog    91 ESSASIQRLLTTQHRNFDSYFQDLLNTSERVLQERFPSQYGDLYSQNSKIFRDLYSELRQYY--- 152

  Fly   186 SNYTNSNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFD 250
                        ||.|   .|||||:..|:.:|.     :.|..:::......|:|::||...::
 Frog   153 ------------RGSG---INLEEALIEFWSRLL-----ERVFKAQHTQYSFSEEYMDCLVKQYE 197

  Fly   251 EMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNC 315
            ::.||||.|::|:....::...:..|:..|..||:|:.:|:.:   .::..|...::|:.|||:|
 Frog   198 QLKPFGDTPREVKLKAARAFIAARSFVQGLNAAADVVRKANQV---PMSTECARAVMKLVYCPHC 259

  Fly   316 NGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTGIINVIKHL 380
            .||     |..|||..||.||||||.|..|. |||.|..:::|| .||.......:.:.|::..:
 Frog   260 RGH-----SSIKLCSNYCWNVMRGCLANQAD-LDSEWRNLIESL-LLVADKFNGASNVENIVGAI 317

  Fly   381 QTYFSEAIMAAMHNGPELEKKVKKTCGTPSLTPYSSGEPDARPPPHKNNVKWATDPDPGMVLFLS 445
            .|..||||.....|...|..||.|.||||..|...|...:.|   .|..   ||..|...|   :
 Frog   318 HTKISEAITHMQENKELLTNKVFKICGTPKKTNKGSKSEERR---RKGK---ATQEDKSAV---A 373

  Fly   446 TIDK-----------SKEFYTTIVDNFCDEQQHS--RDDHSCWSGDRFGDYTQLLINPGTDSQRY 497
            |:|.           .::::.::...||.|:..:  .::..||:|...|.|....:..|..:|..
 Frog   374 TMDNLISDVKGILSDIQDYWVSLPSLFCTEKVTAGPGNEDKCWNGITKGRYMPEPMGSGLANQIN 438

  Fly   498 NPEVPFNAKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSGGGEGQIGDDEEE 562
            ||||..:.......:.:.:.:|..:...:..|...|.:. ..|..:||                 
 Frog   439 NPEVDVDITKPDMTIRQQIMQLKIMTSRLRNAYNGNDVD-FQDTSDDM----------------- 485

  Fly   563 YGGAHGSGDGSGDGPHTPIEESEGTTTNE---VESRDSGKTSGSNPLE---GT--ATW-MLLTLV 618
                  ||.|||||.:..:..|....:.|   ::..........||.|   ||  ::| :|:.||
 Frog   486 ------SGSGSGDGCNEDLCGSGRKLSRETVIIQPATHAVPRQPNPGETGKGTRLSSWDLLICLV 544

  Fly   619 TMLFSSCS 626
            .:|.:.|:
 Frog   545 ALLVAQCT 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 149/587 (25%)
gpc1NP_001072316.1 Glypican 14..548 CDD:366494 149/587 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..369 7/28 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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