DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and gpc5a

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001289165.1 Gene:gpc5a / 559454 ZFINID:ZDB-GENE-140106-260 Length:544 Species:Danio rerio


Alignment Length:574 Identity:148/574 - (25%)
Similarity:244/574 - (42%) Gaps:83/574 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DAVGGSTHQCDAVKSYFESIDI---KSSGTYSEKGA---IC---GGNCCNNATELELRDKAAGMF 115
            |...|:...|:.|:..|:...|   ||.......|:   :|   ...||....|...:..|....
Zfish    19 DVCQGNLMDCEEVRKVFQLKQIGPAKSIPDTPRTGSDLQVCLSRNLTCCTKKMEERYQVAARRDI 83

  Fly   116 EQLLHHHTSSLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRM-VPSSRMMIHQLYTEIM 179
            :.||...:|||:.:...|...||..|..|.:.:||.|.|:..:.:..: .|::...:.:.:||:.
Zfish    84 QNLLQISSSSLKFLFSRNVAAFQESVESLVRQAENHTLSILHQSHRDLSSPAASAPVGEFFTEVA 148

  Fly   180 NHLIYTSNYTNSNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNC 244
            ..:                 :|| :.:|||:.:.||..|||:.|.:::.      ..|...|..|
Zfish   149 LFI-----------------LGS-ELSLEESSQSFFNALFPLIYERLID------SRLSPPYAEC 189

  Fly   245 LQHNFDEMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKM 309
            |:.:..::.|||..|.::.|.:..:...:.||:.||....|:::..|.:   ||:..|:..||:|
Zfish   190 LRSSAQDLAPFGAAPIRLASQIAHASLPARVFLQALHLGIEIINTTDHI---QLSRECRRGLLRM 251

  Fly   310 HYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTGII 374
            .|||:|....||     |.|.|||.||:|||.|..|. :|:.|...|.||..| ...:..:..:.
Zfish   252 SYCPHCQALTSS-----KPCMGYCLNVVRGCLANLAE-VDAHWREFVRSLETL-AGRMHGELDLE 309

  Fly   375 NVIKHLQTYFSEAIMAAMHNGPELEKKVKKTCGTPS-------LTPYSSGEPDARPPPHKNNVKW 432
            .|:........:|:..|..:...:..:|::.||..|       ...:|:|......|....|...
Zfish   310 QVLLGAHELVRDAVAHAQRSTARIHAQVQRVCGQSSRWTEPVNSVQHSTGRASDSIPLRGANRNT 374

  Fly   433 ATDPDPGMVLFLSTIDKSKEFYTTIVDNFCDEQQHSRDDHSCWSGDRFG-DYTQLLINPGTDSQR 496
            ..........||.::...:.||..:.|..|..:..|.|..:||:||... .||..::..|..:|.
Zfish   375 EDSLSSRRTEFLHSLRLYRTFYGALADQLCISELASADGRACWNGDDIARSYTLRVVGNGIKAQA 439

  Fly   497 YNPEVPFNAKAQTGKLNELVDKLFKIRKSI-GAAAPSNSIQATHDIQNDMGEGSGGGEGQIGDDE 560
            .||||  ..|.....:|:::|||..|.:.: |.:.|  .:.:...|:      :|.|:|..||.:
Zfish   440 ENPEV--KVKEADPVINQVIDKLKHINQLLQGRSIP--KLGSLDQIE------TGSGDGNSGDCD 494

  Fly   561 EEYGGAHGSGDGSGDGPHTPIEESEGTTTN--EVESRDS---------GKTSGS 603
            :| .|..|||:|:        .:..||.|.  ..|||.|         |.::||
Zfish   495 DE-DGCWGSGNGA--------VQRRGTVTKLFGSESRRSLWKNKRRQRGVSAGS 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 148/574 (26%)
gpc5aNP_001289165.1 Glypican 28..515 CDD:279494 138/539 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581729
Domainoid 1 1.000 153 1.000 Domainoid score I4244
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3285
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097767at2759
OrthoFinder 1 1.000 - - FOG0003365
OrthoInspector 1 1.000 - - oto41166
orthoMCL 1 0.900 - - OOG6_109158
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4978
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.850

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