DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dally and gpc1a

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001032450.1 Gene:gpc1a / 553367 ZFINID:ZDB-GENE-051120-147 Length:554 Species:Danio rerio


Alignment Length:520 Identity:122/520 - (23%)
Similarity:210/520 - (40%) Gaps:53/520 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SRAKDAVGGSTHQCDAVKSYFESIDIKSSGT-----YSEKGAIC--GGNCCNNATELELRDKAAG 113
            |.:.:..||....|..|:.::.......:|.     ..|...||  |..||.:|.|..|.:.:..
Zfish    16 SLSAENAGGKARSCTDVRQFYSGKGFTLNGVPQSEISGEHLRICPQGYTCCTSAMEETLSNLSRR 80

  Fly   114 MFEQLLHHHTSSLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEI 178
            .||.|:.....|::.:|....:.|.::.|||...||......|......:...:..:...||.|:
Zfish    81 EFEGLVREAGRSIQALLNAQYRTFDTYFLELLDGSERWLEEAFVAALGELYRLNAGVFRDLYAEL 145

  Fly   179 MNHLIYTSNYTNSNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGD-LHEDYV 242
              |..|:                ....|||||:..|:::|.    .:::..|...... |.:|::
Zfish   146 --HRYYS----------------GASLNLEEALDEFWMKLL----ERLLKASDPETASLLSDDFL 188

  Fly   243 NCLQHNFDEMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLL 307
            :|.....:.:.||||.|:::::.|.::...:..|:..|..|.|::.:...:   .|:..|...::
Zfish   189 DCASKQTETLRPFGDAPRELKAKLVRAFIAARAFVQGLNAAGEIVRKVSQV---PLSPECNRAIM 250

  Fly   308 KMHYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTG 372
            |:.|||:|.|..|     .|.|..||||||:||.|..|. ||:.|..:::::.. |.:...::..
Zfish   251 KLVYCPHCRGLGS-----VKPCINYCKNVMKGCLANQAD-LDTEWQSLIETMLQ-VASSFGAEPS 308

  Fly   373 IINVIKHLQTYFSEAIMAAMHNGPELEKKVKKTCGT--PSLTPYSSGEPDARPPPHKNNVKWATD 435
            :..||..:....|||::|...|......||.|.||.  ...||.|..|...:.......:::...
Zfish   309 MDTVIYSIPVRISEAVLAMQENMEIYTSKVFKACGDRGEEGTPSSISEEPKKKERTVTALEYKPS 373

  Fly   436 PDPGMVLFLSTID---KSKE---FYTTIVDNFCD-EQQHSRDDHSCWSGDRFGDYTQLLINPGTD 493
            |.....|.:...|   |.||   ::..:....|. :...|.....||:|.....|...::..|..
Zfish   374 PKSAARLEVQVTDVYSKLKEMQLYWIQLPSALCSGKTASSTTGDKCWNGITKASYLPEVMGDGLA 438

  Fly   494 SQRYNPEVPFNAKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSGGGEGQIGD 558
            :|..||||..:.......:.:.:..|..:...:..|...|.:    |.|:...:.||.|.|...|
Zfish   439 NQINNPEVEIDITKPDRTIRQQIMLLKIMSNRLKNALEGNDV----DFQDTSDDFSGSGSGMCAD 499

  Fly   559  558
            Zfish   500  499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 122/520 (23%)
gpc1aNP_001032450.1 Glypican 20..552 CDD:279494 121/516 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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