DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and Gpc4

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001014130.1 Gene:Gpc4 / 317322 RGDID:1359399 Length:557 Species:Rattus norvegicus


Alignment Length:642 Identity:144/642 - (22%)
Similarity:256/642 - (39%) Gaps:120/642 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAQLLLFTLLCGFVGLSAAKHLDLDGIHHHQHHLHSATTHHRRRLQRDSRAKDAVGGSTHQCDAV 72
            :|:|.|..|||....|||:                        .|..:.::|        .|..|
  Rat     1 MARLGLLALLCTLAALSAS------------------------LLAAEPKSK--------SCSEV 33

  Fly    73 KSYFES--IDIKSSGTYSEKG---AICGGN--CCNNATELELRDKAAGMFEQLLHHHTSSLRGVL 130
            :..:.|  .:...:..|...|   .||..:  ||:...|.:...::...|:.::....:.|:.:.
  Rat    34 RRLYVSKGFNKNDAPLYEINGDHLKICSQDYTCCSQEMEEKYSLQSKDDFQTVVSEQCNHLQAIF 98

  Fly   131 ETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQL 195
            .:..|:|.....||.:.:|...:.:|.|.|..:...:..:...|:.|:..:.:            
  Rat    99 ASRYKKFDEFFKELLENAEKSLNDMFVKTYGHLYMQNSELFKDLFVELKRYYV------------ 151

  Fly   196 GRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFDEMHPFGDIPQ 260
                .|:|  ||||.:..|:.:|.    .:|..| .|:.....::|:.|:....:::.||||:|:
  Rat   152 ----AGNV--NLEEMLNDFWARLL----ERMFRL-VNSQYHFTDEYLECVSKYTEQLKPFGDVPR 205

  Fly   261 QVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGHHSSSRSE 325
            :::..:.::...:..|...|..|.:|::....:   ..|..|...||||.||.:|.|     ...
  Rat   206 KLKLQVTRAFVAARTFAQGLAVARDVVNRVSVV---NPTAQCTQALLKMIYCSHCRG-----LVT 262

  Fly   326 TKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSEAIMA 390
            .|.||.||.|:||||.|. .|.||..|:..:|:: .:|...:.....|.:|:..:....|:|||.
  Rat   263 VKPCYNYCSNIMRGCLAN-QGDLDLEWNNFIDAM-LMVAERLEGPFNIESVMDPIDVKISDAIMN 325

  Fly   391 AMHNGPELEKKVKKTCGTPSLTP---------YSSGEPDARP--PPHKNNVKWATDPDPGMVLFL 444
            ...|..::.:||.:.||.|...|         .|:.....||  |..:......|..|..:....
  Rat   326 MQDNSVQVSQKVFQGCGPPKPLPAGRISRSISESAFSARFRPYHPEQRPTTAAGTSLDRLVTDVK 390

  Fly   445 STIDKSKEFYTTIVDNFCDEQQ-----HSRDDHSCWSGDRFGDYTQLLINPGTDSQRYNPEVPFN 504
            ..:.::|:|::::....|::::     .:.||  ||:|.....|...:...|..:|..||||   
  Rat   391 EKLKQAKKFWSSLPSTVCNDERMAAGNENEDD--CWNGKSKSRYLFAVTGNGLANQGNNPEV--- 450

  Fly   505 AKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSGGGEGQIGDDEEEYGGAHGS 569
             :..|.|.:.|:     :|:          |.|...:.:.|.....|.:....|..:|     .|
  Rat   451 -QVDTSKPDILI-----LRQ----------IMALRVMTSKMKNAYNGNDVDFFDISDE-----SS 494

  Fly   570 GDGSGDG---PHTPIE-ESEGTTTNEVESRDSGKTSGSNPLEGTATWMLLTLVTMLF 622
            |:|||.|   ...|.| |...|..:...:.:...::|..|.|  |...||..:.:||
  Rat   495 GEGSGSGCEYQQCPSEFEYNATDHSGKSANEKADSAGGAPAE--AKPYLLAALCILF 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 133/597 (22%)
Gpc4NP_001014130.1 Glypican 24..552 CDD:279494 134/595 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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