DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and Gpc5

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_038949339.1 Gene:Gpc5 / 306157 RGDID:1308835 Length:610 Species:Rattus norvegicus


Alignment Length:572 Identity:147/572 - (25%)
Similarity:239/572 - (41%) Gaps:99/572 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 AVGGST-----HQCDAVKSYFESIDIKSSGTYSEKGAICG------------------GNCCNNA 102
            |:.|||     ..|:.|:..|:         :...||:.|                  ..||...
  Rat    90 ALLGSTRSEGVESCEEVRKLFQ---------WRLGGAVKGLPEAPRAGPDLQVCLSKNPTCCTRK 145

  Fly   103 TELELRDKAAGMFEQLLHHHTSSLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSS 167
            .|.:.:..|....:|:|...:|:|:.::..||..||..:..|.:.:||.|..||...|..|...:
  Rat   146 MEEQYQIAAQQDLQQVLQTSSSTLKLLISRNAAAFQETLETLIRQAENYTSILFCNTYRNMALEA 210

  Fly   168 RMMIHQLYTEIMNHLIYTSNYTNSNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKN 232
            .....:.:|::..:|.                  ....|.||.|..||..|||:.|:   ||...
  Rat   211 AASTQEFFTDVGLYLF------------------GADVNPEEFVNRFFDSLFPLVYN---HLINP 254

  Fly   233 NLGDLHEDYVNCLQHNFDEMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQ 297
            .:.|....|..|::....::.|||:||::|...:|:|:.....|:.||....||::..|.::   
  Rat   255 GVTDSSLQYSECIRTARQDVSPFGNIPKRVMGQMGRSLLPGRTFLQALNLGIEVINTTDHIH--- 316

  Fly   298 LTDTCKLHLLKMHYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNL 362
            .:..|...||||.|||:|     .|.:.:|.|.|||.||:|||.|.... |:..|...:.||.. 
  Rat   317 FSKECSRALLKMQYCPHC-----QSLTLSKPCMGYCLNVIRGCLAHMTD-LNPHWHAYIRSLEE- 374

  Fly   363 VTTHILSDT-----GIINVIKHLQTYFSEAIMAAMHNGPELEKKVKKTCGTPSLTPYSSGEPDAR 422
                 |||.     .:.:|:.:.....::|::.|..|..:|..:|.|.||.|..|...|......
  Rat   375 -----LSDAMHGTYDVEHVLLNFHLLVNDAMLQAHLNAQKLLDQVNKICGLPVRTATQSPRCTFD 434

  Fly   423 PPPHKNNVKWATDPDPGMVL-------FLSTIDKSKEFYTTIVDNFCDEQQHSRDDHSCWSG-DR 479
            |...::.:|  ..|..|...       |::::...:.||..:.|..|..:..:.:...||:| |.
  Rat   435 PSKERHGMK--ISPRNGEETLANRRKEFINSLRLHRSFYGGLADQLCVNEWAAAEGRPCWNGEDI 497

  Fly   480 FGDYTQLLINPGTDSQRYNPEVPFNAKAQTGKLNELVDKLFKIRKSIGAAAPS-NSIQATHDIQN 543
            ...|.|.::..|..:|..||||  ..:.....:|:::|||..:.:.:...:|. |..:..|    
  Rat   498 VKSYAQRVVGNGVKAQSANPEV--RVRGTDPVVNQIIDKLKHVIQLLQGRSPKPNKWELLH---- 556

  Fly   544 DMGEGSGGG--EGQIGDDEEEYGGAHGSGDGSGDGPHT-PIEESEGTTTNEV 592
               .|||||  |...||.::|.|   ..|.|||:...| .|..|:.|..:::
  Rat   557 ---PGSGGGMLEQSSGDCDDEDG---CGGSGSGEVKRTLKITNSQCTVRSDL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 147/572 (26%)
Gpc5XP_038949339.1 Glypican 93..592 CDD:395918 143/557 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3285
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097767at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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