DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and Gpc3

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_036906.2 Gene:Gpc3 / 25236 RGDID:2725 Length:579 Species:Rattus norvegicus


Alignment Length:593 Identity:137/593 - (23%)
Similarity:235/593 - (39%) Gaps:131/593 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CDAVKSYFESID-----IKSSGTYSEKGAIC---GGNCCNNATELELRDKAAGMFEQLLHHHTSS 125
            |..|:|:|:.:.     :..:........:|   |..||:...|.:.:..|....||||...:..
  Rat    34 CHQVRSFFQRLQPGLKWVPETPVPGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASME 98

  Fly   126 LRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTN 190
            |:.::..||..||.....:.:.::|.|:::|...|..:.|.:...:.:.:|::..::        
  Rat    99 LKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYI-------- 155

  Fly   191 SNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVH--LSKNNLGDLHEDYVNCLQHNFDEMH 253
                     :|| ..|:::.|...|..||||.|.||::  |.::.| |::|    ||:....::.
  Rat   156 ---------LGS-DINVDDMVNELFDSLFPVIYTQMMNPGLPESVL-DINE----CLRGARRDLK 205

  Fly   254 PFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGH 318
            .||..|:.:.:.:.||:.::.:|:.||....||::..|.|   :.:..|...|.:|.||..|.| 
  Rat   206 VFGSFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHL---KFSKDCGRMLTRMWYCSYCQG- 266

  Fly   319 HSSSRSETKLCYGYCKNVMRGCSAEYAGL--LDSPWSGVVDSLNNLVT-THILSDTGIINVIKHL 380
                ....|.|.|||..||:||   .||:  :|..|...:.||..||. .:.:.|  :.||:..|
  Rat   267 ----LMMVKPCGGYCNVVMQGC---MAGVVEIDKYWREYILSLEELVNGMYRIYD--MENVLLGL 322

  Fly   381 QTYFSEAIMAAMHNGPELEKKVKKTCGTPSLTPYSSGEPDARPPPHKNNVKWATDPDPGMVLFL- 444
            .:...::|.....||.:|...:.|.|.......|.|                |..|:.   ||: 
  Rat   323 FSTIHDSIQYVQKNGGKLTTTIGKLCAHSQQRQYRS----------------AYYPED---LFID 368

  Fly   445 --------------------STIDKSK---EFYTTIVDNFCDEQQHSRDDHSCWSGDRFGD-YTQ 485
                                ..|.|.|   .||:.:....|.....:.:|..||:|....: |:|
  Rat   369 KKVLKVARVEHEETLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQ 433

  Fly   486 LLINPGTDSQRYNPEVPFN-----AKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDM 545
            .....|..:|       ||     .|.....:::::|||    |.|.....:.|:.....:...:
  Rat   434 KAARNGMKNQ-------FNLHELKMKGPEPVVSQIIDKL----KHINQLLRTMSVPKGKVVDKSL 487

  Fly   546 GEGSGGGEGQIGDDEEEYGGAHGSG---------------------DGSGDGPHTPIEESEGTTT 589
            .| .|...|..||||:|..|:.|.|                     |..|:..|...:::|.||:
  Rat   488 DE-EGLESGDCGDDEDECIGSSGDGMMKVKNQLRFLAELAYDLDVDDAPGNKQHGNQKDNEITTS 551

  Fly   590 NEVESRDS 597
            :.|.:..|
  Rat   552 HNVGNMPS 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 137/593 (23%)
Gpc3NP_036906.2 Glypican 14..576 CDD:395918 137/593 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 533..553 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341711
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097767at2759
OrthoFinder 1 1.000 - - FOG0003365
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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