DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dally and GPC4

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001439.2 Gene:GPC4 / 2239 HGNCID:4452 Length:556 Species:Homo sapiens


Alignment Length:635 Identity:147/635 - (23%)
Similarity:256/635 - (40%) Gaps:107/635 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAQLLLFTLLCGFVGLSAAKHLDLDGIHHHQHHLHSATTHHRRRLQRDSRAKDAVGGSTHQCDAV 72
            :|:..|..|||....||||.         ....|.|.:....|||.                  |
Human     1 MARFGLPALLCTLAVLSAAL---------LAAELKSKSCSEVRRLY------------------V 38

  Fly    73 KSYFESIDIKSSGTYSEKGAIC--GGNCCNNATELELRDKAAGMFEQLLHHHTSSLRGVLETNAK 135
            ...|...|........:...||  |..||:...|.:...::...|:.::....:.|:.|..:..|
Human    39 SKGFNKNDAPLHEINGDHLKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYK 103

  Fly   136 QFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQLGRRGI 200
            :|.....||.:.:|...:.:|.|.|..:...:..:...|:.|:..:.:                :
Human   104 KFDEFFKELLENAEKSLNDMFVKTYGHLYMQNSELFKDLFVELKRYYV----------------V 152

  Fly   201 GSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFDEMHPFGDIPQQVQSN 265
            |:|  ||||.:..|:.:|.    .:|..| .|:.....::|:.|:....:::.||||:|::::..
Human   153 GNV--NLEEMLNDFWARLL----ERMFRL-VNSQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQ 210

  Fly   266 LGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGHHSSSRSETKLCY 330
            :.::...:..|...|..|.:|:|:...:   ..|..|...||||.||.:|.|     ....|.||
Human   211 VTRAFVAARTFAQGLAVAGDVVSKVSVV---NPTAQCTHALLKMIYCSHCRG-----LVTVKPCY 267

  Fly   331 GYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSEAIMAAMHNG 395
            .||.|:||||.|. .|.||..|:..:|:: .:|...:.....|.:|:..:....|:|||....|.
Human   268 NYCSNIMRGCLAN-QGDLDFEWNNFIDAM-LMVAERLEGPFNIESVMDPIDVKISDAIMNMQDNS 330

  Fly   396 PELEKKVKKTCGTPSLTP-------YSSGEPDARPPPHKNNVKWATDPDPGMVLFLSTI----DK 449
            .::.:||.:.||.|...|       .|.....||..||....:..|.....:...::.:    .:
Human   331 VQVSQKVFQGCGPPKPLPAGRISRSISESAFSARFRPHHPEERPTTAAGTSLDRLVTDVKEKLKQ 395

  Fly   450 SKEFYTTIVDNFCDEQQHSR---DDHSCWSGDRFGDYTQLLINPGTDSQRYNPEVPFNAKAQTGK 511
            :|:|::::..|.|::::.:.   ::..||:|.....|...:...|..:|..||||    :..|.|
Human   396 AKKFWSSLPSNVCNDERMAAGNGNEDDCWNGKGKSRYLFAVTGNGLANQGNNPEV----QVDTSK 456

  Fly   512 LNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSGGGEGQIGDDEEEYGGAHGSGDGSGDG 576
            .:.|:     :|:          |.|...:.:.|.....|.:....|..:|     .||:|||.|
Human   457 PDILI-----LRQ----------IMALRVMTSKMKNAYNGNDVDFFDISDE-----SSGEGSGSG 501

  Fly   577 ---PHTPIEESEGTTTNEVES-RDSGKTSGSNPLEGTATWMLLTLVTMLF 622
               ...|.|.....|.:..:| .:...::|..|  |...: |||:..:||
Human   502 CEYQQCPSEFDYNATDHAGKSANEKADSAGVRP--GAQAY-LLTVFCILF 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 133/590 (23%)
GPC4NP_001439.2 Glypican 26..551 CDD:307347 137/601 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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