DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dally and GPC2

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_689955.1 Gene:GPC2 / 221914 HGNCID:4450 Length:579 Species:Homo sapiens


Alignment Length:578 Identity:127/578 - (21%)
Similarity:215/578 - (37%) Gaps:133/578 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 CCNNATELELRDKAAGMFEQLLHHHTSSLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTR 162
            ||::.||..|..:....|..|:....|.|...|....::|....||:..::::....|||..|.|
Human    68 CCSSETEQRLIRETEATFRGLVEDSGSFLVHTLAARHRKFDEFFLEMLSVAQHSLTQLFSHSYGR 132

  Fly   163 MVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQLGRRGIGSVQSNLEEAVRHFFVQL----FPVAY 223
            :.....::.:.|::.:.:.             .|..|.|     |::.:..|:.||    ||:.:
Human   133 LYAQHALIFNGLFSRLRDF-------------YGESGEG-----LDDTLADFWAQLLERVFPLLH 179

  Fly   224 HQMVHLSKNNLGDLHEDYVNCLQH----NFDEMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAA 284
            .|.         ....||:.||..    ....:.||||.|::::..:.:::..:..|:..|....
Human   180 PQY---------SFPPDYLLCLSRLASSTDGSLQPFGDSPRRLRLQITRTLVAARAFVQGLETGR 235

  Fly   285 EVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLD 349
            .|:|||..:   .:::.|...|:::..||.|.|..|     ...|.|:|.||:|||.:...  |:
Human   236 NVVSEALKV---PVSEGCSQALMRLIGCPLCRGVPS-----LMPCQGFCLNVVRGCLSSRG--LE 290

  Fly   350 SPWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYF-------------SEAIMAAMHNGPELEKK 401
            ..|...:|.|      .||:|        .||..|             ||.:|....|..::..:
Human   291 PDWGNYLDGL------LILAD--------KLQGPFSFELTAESIGVKISEGLMYLQENSAKVSAQ 341

  Fly   402 VKKTCGTPSLTPYSSGEPDARPPPHKNNVKWA--TDPD-----PGMVL------FLSTIDKSKEF 453
            |.:.||.|.  |..:....|.||..:....|:  |:.:     .|..|      ....:.:.:.|
Human   342 VFQECGPPD--PVPARNRRAPPPREEAGRLWSMVTEEERPTTAAGTNLHRLVWELRERLARMRGF 404

  Fly   454 YTTIVDNFCDEQQHSRDDH----SCWSGDRFGDYTQLLINPGTDSQRYNPEVPFNAKAQTGKLNE 514
            :..:....|.:.:.:.|..    .||:|...|.|...::......|..|||:..:|.........
Human   405 WARLSLTVCGDSRMAADASLEAAPCWTGAGRGRYLPPVVGGSPAEQVNNPELKVDASGPDVPTRR 469

  Fly   515 LVDKLFKIRKSIGAAAPSNSIQATHDIQ----NDMGEGSGGGEGQIGDDEEEYGGA--------- 566
               :..::|   .|.|...:....||:.    ::...|||||: |..||  ...||         
Human   470 ---RRLQLR---AATARMKTAALGHDLDGQDADEDASGSGGGQ-QYADD--WMAGAVAPPARPPR 525

  Fly   567 -------HGSGDGSGDGPHTPIEESEGTTTNEVESRDSGKTSGSNPLEGTATWMLLTL 617
                   .|||...|.|         ....|:..||..|.:.|.:    |.|.::|:|
Human   526 PPYPPRRDGSGGKGGGG---------SARYNQGRSRSGGASIGFH----TQTILILSL 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 127/578 (22%)
GPC2NP_689955.1 Glypican 29..512 CDD:279494 111/505 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..468 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 485..555 20/81 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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