DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and gpn-1

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_510582.1 Gene:gpn-1 / 181658 WormBaseID:WBGene00001687 Length:543 Species:Caenorhabditis elegans


Alignment Length:535 Identity:111/535 - (20%)
Similarity:195/535 - (36%) Gaps:106/535 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YFESIDIKSSGTYSEKGAICGGNCCNNATELELRDKAAGMFEQLLHHHTSS---LRGVLETNAK- 135
            ||...||        .|.:|..:..:..|..|.........:.|...|...   :|..|.:..: 
 Worm    24 YFTRRDI--------HGVMCSSSFEDQCTMEERSRLQTNTVDMLTRKHQDRVIVIRSFLTSQIRI 80

  Fly   136 --QFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQLGRR 198
              :|.|..|....:..::   :|||.|......:..:::..:.:|...                 
 Worm    81 FNEFFSKTLRTVHMDLDL---MFSKTYGSFYQENIQLLNDFFKKIKGF----------------- 125

  Fly   199 GIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFDEMHPFGDIPQQVQ 263
            .:...:::::..|..||.:||     |::....|....:..|...|::..:.|:..|.||||::.
 Worm   126 SVSFAETSMKTIVELFFDELF-----QVMFSIANPFYSITNDQRVCMESFYREIEAFDDIPQKIV 185

  Fly   264 SNLGKSVHMSN--VFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGHHSSSRSET 326
            :.|  |:.:||  .|:.:|.....:|   :........:.|:..|.:|..|..|      .|...
 Worm   186 NQL--SLPLSNWKHFLGSLESLNGIL---EGYLNITFKEECERGLTRMETCAQC------QRISE 239

  Fly   327 KLCYGYCKNVMRGCSAEYAGLLDS--PWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSEAIM 389
            |.|..||.|::.||:.:   :|||  .|....:|:..| ...:.....:::.::.:....|||| 
 Worm   240 KPCQAYCVNILSGCTHQ---MLDSEGAWRAATESMIKL-GNQLNHRQNLVSALQPIPVLISEAI- 299

  Fly   390 AAMHNGPELEKKVKKTCGTPSLTPYSSGEPDARPPPHKN----NVKWATDPDPGMVL------FL 444
              ||...:.:....|..|...|.....|....|....|.    ..|.:.|   .::|      |.
 Worm   300 --MHFQEKRDYITNKMIGKCLLNNEDFGLRKKRSAKFKAFPVITTKRSRD---HLILNQMFQSFA 359

  Fly   445 STIDKSKEFYTTIVDNFC-DEQQHSRDDHSCWSGDRFGDYTQLLIN----------PGTDSQRYN 498
            :.:|:.|.|:..:.:..| .|...|::|..||:|...|:|...|:|          .|||...:.
 Worm   360 NKMDEWKVFFGNLPEYLCRGEDWASKEDERCWNGTGVGEYKLPLVNYTNPFSNPEYQGTDFLTFR 424

  Fly   499 PEVPFNAKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSGGGEGQIGDDEEEY 563
                       |...|...:|..:...|      :.|.:..|.|......|...|.:|..|:|:|
 Worm   425 -----------GNYIEERLRLHWLHSRI------SHILSGKDSQKSEAYYSHKAEARIQSDDEDY 472

  Fly   564 GG----AHGSGDGSG 574
            ..    :.|:..|||
 Worm   473 SDYEYESSGNFPGSG 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 111/535 (21%)
gpn-1NP_510582.1 Glypican 43..>414 CDD:279494 85/416 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10822
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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