DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and Gpc4

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_032176.2 Gene:Gpc4 / 14735 MGIID:104902 Length:557 Species:Mus musculus


Alignment Length:647 Identity:144/647 - (22%)
Similarity:255/647 - (39%) Gaps:130/647 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAQLLLFTLLCGFVGLSAAKHLDLDGIHHHQHHLHSATTHHRRRLQRDSRAKDAVGGSTHQCDAV 72
            :|:|.|..|||....|||:                        .|..:.::|        .|..|
Mouse     1 MARLGLLALLCTLAALSAS------------------------LLAAELKSK--------SCSEV 33

  Fly    73 KSYFES--IDIKSSGTYSEKG---AICGGN--CCNNATELELRDKAAGMFEQLLHHHTSSLRGVL 130
            :..:.|  .:...:..|...|   .||..:  ||:...|.:...::...|:.::....:.|:.:.
Mouse    34 RRLYVSKGFNKNDAPLYEINGDHLKICPQDYTCCSQEMEEKYSLQSKDDFKTVVSEQCNHLQAIF 98

  Fly   131 ETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNSNGQL 195
            .:..|:|.....||.:.:|...:.:|.|.|..:...:..:...|:.|:..:.:            
Mouse    99 ASRYKKFDEFFKELLENAEKSLNDMFVKTYGHLYMQNSELFKDLFVELKRYYV------------ 151

  Fly   196 GRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFDEMHPFGDIPQ 260
                .|:|  ||||.:..|:.:|.    .:|..| .|:.....::|:.|:....:::.||||:|:
Mouse   152 ----AGNV--NLEEMLNDFWARLL----ERMFRL-VNSQYHFTDEYLECVSKYTEQLKPFGDVPR 205

  Fly   261 QVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGHHSSSRSE 325
            :::..:.::...:..|...|..|.:|:|:...:   ..|..|...||||.||.:|.|     ...
Mouse   206 KLKLQVTRAFVAARTFAQGLAVARDVVSKVSVV---NPTAQCTHALLKMIYCSHCRG-----LVT 262

  Fly   326 TKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSEAIMA 390
            .|.||.||.|:||||.|. .|.||..|:..:|:: .:|...:.....|.:|:..:....|:|||.
Mouse   263 VKPCYNYCSNIMRGCLAN-QGDLDFEWNNFIDAM-LMVAERLEGPFNIESVMDPIDVKISDAIMN 325

  Fly   391 AMHNGPELEKKVKKTCGTPSLTP---------YSSGEPDARP--PPHKNNVKWATDPDPGMVLFL 444
            ...|..::.:||.:.||.|...|         .|:.....||  |..:......|..|..:....
Mouse   326 MQDNSVQVSQKVFQGCGPPKPLPAGRISRSISESAFSARFRPYHPEQRPTTAAGTSLDRLVTDVK 390

  Fly   445 STIDKSKEFYTTIVDNFCDEQQ-----HSRDDHSCWSGDRFGDYTQLLINPGTDSQRYNPEVPFN 504
            ..:.::|:|::::....|::::     .:.||  ||:|.....|...:...|..:|..||||   
Mouse   391 EKLKQAKKFWSSLPSTVCNDERMAAGNENEDD--CWNGKGKSRYLFAVTGNGLANQGNNPEV--- 450

  Fly   505 AKAQTGKLNELVDKLFKIRKSIGAAAPSNSIQATHDIQNDMGEGSGGGEGQIGDDEEEYGGAHGS 569
             :..|.|.:.|:     :|:          |.|...:.:.|.....|.:....|..:|     .|
Mouse   451 -QVDTSKPDILI-----LRQ----------IMALRVMTSKMKNAYNGNDVDFFDISDE-----SS 494

  Fly   570 GDGSGDG---PHTPIE------ESEGTTTNEVESRDSGKTSGSNPLEGTATWMLLTLVTMLF 622
            |:|||.|   ...|.|      :..|.:.||......|..:.:.|       .||..:.:||
Mouse   495 GEGSGSGCEYQQCPSEFEYNATDHSGKSANEKADSAGGAHAEAKP-------YLLAALCILF 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 133/602 (22%)
Gpc4NP_032176.2 Glypican 26..552 CDD:279494 134/598 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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