DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and gpc5b

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001289150.1 Gene:gpc5b / 101886726 ZFINID:ZDB-GENE-060503-64 Length:610 Species:Danio rerio


Alignment Length:635 Identity:151/635 - (23%)
Similarity:257/635 - (40%) Gaps:141/635 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CDAVKSYFESIDIKSSGTYSEKGA------IC---GGNCCNNATELELRDKAAGMFEQLLHHHTS 124
            |..||:.|:...:.|.....|..|      ||   |..||....|......|.....|.:..::.
Zfish    32 CHEVKTAFQLRQVGSLRWVPETAATDAELLICKHQGPTCCTRKMEESYYSAAQRDTLQNILSYSF 96

  Fly   125 SLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYT 189
            .|:.::..:|..||.....|...:.|.|:|||...|..:...:|.::..|:.::..:|       
Zfish    97 ELKYLILGHASSFQDTFHSLLSFTLNHTNSLFDTTYETISQDARPLVSTLFNDLDLYL------- 154

  Fly   190 NSNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGD----LHEDYVNCLQHNFD 250
                    ||..:|  ::|.:|..|:.:|||:.|.   ||....||.    ...:...||:....
Zfish   155 --------RGDDNV--SVEHSVHRFYDKLFPLVYQ---HLVNPGLGSPVSTWSAEGTECLRATRH 206

  Fly   251 EMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNC 315
            :::|||..||::...|.|::.:......||...|:||:..:::   .:...|...|::|.:||:|
Zfish   207 DIYPFGHHPQELAQGLSKALVVGRALSRALAVGADVLNITESV---GMGRVCGRALVRMLFCPHC 268

  Fly   316 NGHHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDSPWS---GVVDSLNNLVTTHILSDTGIINVI 377
            .|     .:..:.|.|.|.||||||.|..|. ||:||.   .:::.|:..::.....:.|::.:.
Zfish   269 RG-----LTLIRPCGGLCLNVMRGCLAGVAE-LDAPWRDYVSLLEKLSGALSERYEVELGLLRIR 327

  Fly   378 KHLQTYFSEAIMAAMHNGPELEKKVKKTCG--------TP------SLTPYSSGEPDARPPPHKN 428
            :.:    ::||:.|..:||.|...|.|.||        ||      ||||  |..|.........
Zfish   328 ERI----NDAILTAQLHGPHLSAVVGKVCGSLTESVSSTPANSTLGSLTP--SVNPSLELQTSNT 386

  Fly   429 NVKWATDPDPG-----MVL------------------------FLSTIDKSKEFYTTIVDNFCDE 464
            :....|.||.|     :.|                        |:..|.:.|.|::.:.:..| |
Zfish   387 SSSHTTLPDTGNQHEHIALKRRSLPLKASKYDKPRSLKKISKEFMGYIQRYKSFFSNLPEMLC-E 450

  Fly   465 QQHSRDDHSCWSG-DRFGDYTQLLINPGTDSQRYNPEVPFNAKAQTGKLNELVDKLFKIRKSIGA 528
            .:...|:::|||| |....||..::..|..:|::|||:    |.:|..     ..|..:::.:  
Zfish   451 GEVVMDENTCWSGEDVVESYTGHVVGNGLQAQKHNPEI----KVKTAN-----PVLVSVKEML-- 504

  Fly   529 AAPSNSIQATHDIQNDMGEGSGGGEGQIGDDEEEYGGAHGSGD--------GSGDGPHTPIEESE 585
                      .....:|...:|.|.|  |.|.:|...|.|||:        |||.|........|
Zfish   505 ----------EHFNQEMWATTGLGTG--GTDVKESSSAEGSGECDDEDGCQGSGRGDERVHLTKE 557

  Fly   586 GTTTNEVESR---------DSG-----KTSGSNPLEGTATWMLLTLVTML 621
            ..::.::.|:         ::|     :|||...:...:..:||.|:.:|
Zfish   558 NISSVQIPSQYGKIPVQPPNNGPKRDVQTSGVTHIPTISFILLLPLLQLL 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 151/635 (24%)
gpc5bNP_001289150.1 Glypican 26..591 CDD:279494 147/617 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581728
Domainoid 1 1.000 153 1.000 Domainoid score I4244
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097767at2759
OrthoFinder 1 1.000 - - FOG0003365
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10822
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4978
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.810

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