DRSC/TRiP Functional Genomics Resources

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Protein Alignment dally and gpc6b

DIOPT Version :10

Sequence 1:NP_523983.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_073767622.1 Gene:gpc6b / 100331176 ZFINID:ZDB-GENE-130515-2 Length:553 Species:Danio rerio


Alignment Length:605 Identity:149/605 - (24%)
Similarity:244/605 - (40%) Gaps:133/605 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CDAVK-SY----FESIDIKSSGTYSEKGAICG--GNCCNNATELELRDKAAGMFEQLLHHHTSSL 126
            |..|| :|    |.|.|:.:..|..|...:|.  ..|||...|.....:::..|::|:...:..|
Zfish    21 CSLVKDAYSALGFSSDDVPAEQTSGEDLRVCAPLEACCNTQMEESFSHRSSHDFQKLMDDASEEL 85

  Fly   127 RGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTNS 191
            |....:..|:|....|||.:.:|...:.:|.:.|.:....:..:...|::|:...      ||..
Zfish    86 RDTFMSGHKRFDDFFLELLESTERSLNEMFVRTYGKPYLQNAEVFQSLFSELRRF------YTGG 144

  Fly   192 NGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFDEMHPFG 256
            |            .||||.::.|:.:|....:..:     |:...:.::|:.|:....:::.|||
Zfish   145 N------------VNLEEMLKDFWTRLLERMFQLL-----NSQFQITDEYLECIGKYTEQLRPFG 192

  Fly   257 DIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGHHSS 321
            |:|::::|.:.::...:..|:..|....:|   |:.:....::.:|.....||.||..|.|..: 
Zfish   193 DVPKKLKSQVTRAFIAARTFVQGLAVGRDV---ANRVAQVSMSSSCVSGFTKMLYCSYCQGLFT- 253

  Fly   322 SRSETKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHILSDTGIINVIKHLQTYFSE 386
                .|.|..||.|||:||.|..|. |::.||..:|:| .|:|..:.....|.:|::.:....||
Zfish   254 ----LKPCRNYCLNVMKGCLANQAD-LNNEWSKYIDAL-LLLTQRLEGPFNIESVMEPIDVKISE 312

  Fly   387 AIMAAMHNGPELEKKVKKTCGTPS------------------LTPY------SSGEPDARPPPHK 427
            |||....|..:|..:|.:.||.|.                  ..||      :||     .|.|:
Zfish   313 AIMNMQENSMQLSYQVFQGCGQPEPAGMTRSARSVHDSFSGRFKPYEELPTVASG-----APLHR 372

  Fly   428 NNVKWATDPDPGMVLFLSTIDKSKE-------FYTTIVDNFCDEQQHSRD----DHSCWSGDRFG 481
            ....|.        |...::.:.||       |:.::...||.|:|.|.|    |..||:|...|
Zfish   373 LRSVWK--------LLQYSVSEMKEKLKHFQSFWVSLPLVFCKEEQISADGQTEDQQCWNGHHSG 429

  Fly   482 DYTQLLINPGTDSQRYNPEVPFNAKAQTGKLNELVDKLFKIRKSIGA-AAPSNSIQATHDIQNDM 545
            .|...:...|...|..||||..:....        |.|  ||:.|.| ...||.::..:|     
Zfish   430 RYIAEVQKDGLAQQASNPEVIVDVSRP--------DSL--IRQQILALRIMSNKLKNAYD----- 479

  Fly   546 GEGSGGGEGQIGDDEEEYGGAHGSGDGSGDG-------------PHTPIEESEGTTTNEVESRDS 597
                 |.:....|..||     .||.|||.|             .|||:.::|  ||:||.:   
Zfish   480 -----GHDINFQDSNEE-----SSGSGSGSGCMESCVTASDSSITHTPVPKAE--TTDEVAT--- 529

  Fly   598 GKTSGSNPLEGTATWMLLTL 617
             ....::.||.....:.|||
Zfish   530 -AADSASALEICTLMLTLTL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_523983.1 Glypican 51..622 CDD:460084 149/605 (25%)
gpc6bXP_073767622.1 None

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