DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dally and gpc5c

DIOPT Version :9

Sequence 1:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_005171487.2 Gene:gpc5c / 100006305 ZFINID:ZDB-GENE-141112-1 Length:590 Species:Danio rerio


Alignment Length:609 Identity:165/609 - (27%)
Similarity:248/609 - (40%) Gaps:111/609 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 HQCDAVKSYFESIDIKSSGTYSEKGA------IC---GGNCCNNATELELRDKAAGMFEQLLHHH 122
            |.|..||:.|:...|.......|..|      :|   |.:||....|...|........|.:..:
Zfish    26 HSCHEVKTAFQVRQIGQLKWVPETPATDVELSVCKHAGPSCCTRRMEDSYRAAVLRDTTQNIGSY 90

  Fly   123 TSSLRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSN 187
            :..|:.::..:|..||.....|...|:|...|||...|:.::.|....|..|:|::...|     
Zfish    91 SYELKFLISAHAAAFQDTFQSLISFSQNHLTSLFETTYSSLMSSISPHIVCLFTDLSRFL----- 150

  Fly   188 YTNSNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVH-----------LSKNNLGDLHEDY 241
                      :|.|:|  ::|.||..||..|||:.:.|:|:           ...|.|||     
Zfish   151 ----------QGTGNV--SVEAAVHCFFDSLFPLVHTQIVNPGMEGSIGTDASEGNQLGD----- 198

  Fly   242 VNCLQHNFDEMHPFGDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHL 306
              ||:....:::|||..|:.:..:|..::....|...||.:.:||::..:.   ..|:..|...|
Zfish   199 --CLRMTRQDVNPFGPHPKAMAKDLADALRAGRVLSLALAEGSEVMNITET---AGLSKECTRAL 258

  Fly   307 LKMHYCPNCNG----HHSSSRSETKLCYGYCKNVMRGCSAEYAGLLDSPWSGVVDSLNNLVTTHI 367
            ::||||.:|.|    |         .|..||.||||||.|.|:. |..||...|..|.:| |..:
Zfish   259 VRMHYCSHCRGLTLIH---------ACSNYCLNVMRGCLASYSE-LHQPWRQYVTILQDL-TQMV 312

  Fly   368 LSDTGIINVIKHLQTYFSEAIMAAMHNGPELEKKVKKTCGTPSLTPYSSGE--PDA--RPPP--- 425
            .....:...:..::....|||:.|..:||.|...|.|.||..|.|..|:..  |.|  :|||   
Zfish   313 AGAHNLELALLGIRGQVEEAILYAQLHGPRLTATVDKVCGHSSNTSTSTVRTFPPASVKPPPVNI 377

  Fly   426 ----------------HKNNVKWATDPDPGMVL------FLSTIDKSKEFYTTIVDNFCDEQQHS 468
                            |.:.....:..|.|..|      |...|.:.|.||..:.|..||.:: .
Zfish   378 SQDAPGADKIGMLAHLHSSLPLKNSKSDRGRTLKKVAREFTIYISRYKSFYAMLPDMLCDGEK-V 441

  Fly   469 RDDHSCWSGDR-FGDYTQLLINPGTDSQRYNPEVPFNAKAQTGKLNELVDKLFKIRKSIGAAAPS 532
            .|:.||||||. ...||..::..|..:||.||||  ..:.....|.::.::|......:....|.
Zfish   442 VDEFSCWSGDDVVKSYTARVVGNGVLAQRQNPEV--RVRGFDPVLMDVKNRLELFNMEVQEVIPG 504

  Fly   533 NSIQATHDIQNDMGEGSGGGEGQIGDDEEEYGGAHGSGDGSGDGPHTPIEESEGTTTNEVESRD- 596
            ...:.:.|   |.|.|...||   .|||:   |..|||: |.:.| :|.||....||.:|...: 
Zfish   505 VGHRRSGD---DPGSGESSGE---CDDED---GCEGSGE-SVESP-SPKEEDLSKTTGKVSFNEV 558

  Fly   597 ---SGKTSGSNPLEGTATWMLLTL 617
               ..|.|....| .||.::::.|
Zfish   559 PIPRNKPSSDASL-STAGFIIIIL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dallyNP_001246685.1 Glypican 51..622 CDD:279494 165/609 (27%)
gpc5cXP_005171487.2 Glypican 9..575 CDD:279494 163/601 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 153 1.000 Domainoid score I4244
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097767at2759
OrthoFinder 1 1.000 - - FOG0003365
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17275
SonicParanoid 1 1.000 - - X4978
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.050

Return to query results.
Submit another query.