DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13312 and Gasp

DIOPT Version :9

Sequence 1:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster


Alignment Length:161 Identity:35/161 - (21%)
Similarity:57/161 - (35%) Gaps:36/161 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 AAVQSQGKYAVGYNAY---TTCRQYIYCTLVDGSWIGQTYTCPGSMYFDSA-----SEMCVSTMP 241
            |..||..|....:..|   |:|.:|..|    .:.:.:..||...:.||:.     :|.|.....
  Fly    15 AVAQSSFKCPDDFGFYPHDTSCDKYWKC----DNGVSELKTCGNGLAFDATDSKYLTENCDYLHN 75

  Fly   242 STCSTTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVGTDASTTCHQYIDCFLNGGTWGG--NMY 304
            ..|      ...|...|..:.|  :|..:.  |.:|    ....|..:.:|      |.|  :.|
  Fly    76 VDC------GDRTELEPPITTP--HCSRLY--GIFP----DENKCDVFWNC------WNGEPSRY 120

  Fly   305 TCPGSLYYNSASRTCV--STLPSTCSTTVAS 333
            .|...|.|:..:|.|:  ..:|...:..||:
  Fly   121 QCSPGLAYDRDARVCMWADQVPECKNEEVAN 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13312NP_648260.1 None
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 12/54 (22%)
CBM_14 97..144 CDD:366726 13/58 (22%)
CBM_14 170..218 CDD:366726
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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