DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13312 and obst-F

DIOPT Version :9

Sequence 1:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster


Alignment Length:224 Identity:45/224 - (20%)
Similarity:69/224 - (30%) Gaps:108/224 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 CASGYV-----------------CNINDTQICGLPADGVMPTCSYSDDSTT---TTVSSTTSSTT 171
            ||.|::                 |.::|..||            |.:...:   |.|.:|....|
  Fly   169 CAYGHLHRHQCGRGTAWNFEKSECQLSDQAIC------------YGESQISEPHTDVETTMKVPT 221

  Fly   172 AAPPSTSSASTYCAAVQSQGKYAVGYNAYTTCRQYIYCTLVDGSWIGQTYTCPGSMYFDSASEMC 236
            |   ::..|.|.|        |.||.:.|||.:|::              |.|      ..:|:.
  Fly   222 A---NSEGAVTVC--------YIVGSSEYTTLQQFL--------------TSP------EITELP 255

  Fly   237 VSTMPS---------TCSTTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVGTDASTTCHQYIDC 292
            ..|.||         ||.:|..:        ..|:||                    .|.:|..|
  Fly   256 PVTPPSPPRAEANALTCPSTKQS--------YMSHPE--------------------DCSKYYIC 292

  Fly   293 FLNGGTWGGN--MYTCPGSLYYNSASRTC 319
            .      ||.  :.:||..|:::..|..|
  Fly   293 I------GGMPVLTSCPKGLFWDQKSGFC 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13312NP_648260.1 None
obst-FNP_649186.1 CBM_14 43..94 CDD:279884
CBM_14 156..198 CDD:279884 5/28 (18%)
CBM_14 272..321 CDD:279884 15/78 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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