DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13312 and obst-J

DIOPT Version :9

Sequence 1:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster


Alignment Length:292 Identity:61/292 - (20%)
Similarity:81/292 - (27%) Gaps:103/292 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DCPSGY-------VCVSGS---SGVLCQPEDSASDSQADCQECNKCDETQTFACTGTQSFALCLG 116
            :||:.|       :||.|:   ..|.|...:|....|:||....:|.|..:||            
  Fly    63 NCPAEYHFSKKLMICVPGACTDESVFCGLTNSVERVQSDCTRYRQCLEGGSFA------------ 115

  Fly   117 TDTVQDSVGTCASGYVCNINDTQICGLPADGVMPTCSYSDDSTTTTVSSTTSSTTAAPPSTSSAS 181
                   |..|:.|                      :|.|           .:..|..|...||:
  Fly   116 -------VAKCSVG----------------------NYFD-----------PARRACLPVAISAA 140

  Fly   182 TYCAAVQSQGKYAVGYNAY----TTCRQYIYCTLVDGSWIGQTYTCPGSMYFDSASEMCVSTMPS 242
            ..|:.|...       ||.    :.|..|..|    .|...:...||...|||.....||.....
  Fly   141 HQCSCVLPD-------NATLANPSDCETYFRC----HSGQAELVQCPSGDYFDERVSSCVPDHTG 194

  Fly   243 TCSTTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVGT---DASTTCHQYIDC----FLNGGTWG 300
            .|....|...|.|.           ||:........|:   ..|..|.:|..|    .|.     
  Fly   195 ICLEKPTMPPTLTE-----------QALAMDECIRTGSRLAPHSRDCQRYYICAKKRVLE----- 243

  Fly   301 GNMYTCPGSLYYNSASRTCVSTLPSTCSTTVA 332
               ..||...|::...|.|...|.|.|....|
  Fly   244 ---MRCPRGQYFDVVRRYCALDLGSECQALQA 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13312NP_648260.1 None
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 4/15 (27%)
CBM_14 145..192 CDD:279884 14/57 (25%)
CBM_14 216..259 CDD:279884 10/50 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.