DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13312 and CG7248

DIOPT Version :10

Sequence 1:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_648530.1 Gene:CG7248 / 39356 FlyBaseID:FBgn0036229 Length:796 Species:Drosophila melanogaster


Alignment Length:460 Identity:104/460 - (22%)
Similarity:152/460 - (33%) Gaps:158/460 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RVCLPLGLPLLLFLLG-----------------------------------CLVSSTHGTCNVCN 34
            :|||.  .|.:|:|.|                                   |:|||...: ..|.
  Fly     2 KVCLV--FPFILWLWGTPGVDVLSIKGPSSVGWNNVNQNVILSFSKRNSHECVVSSQQNS-TYCE 63

  Fly    35 TVNN------------LTCYSS--------------TQMQSCQ----VDV----LSTATPTDCPS 65
            :::|            :|||.|              :.:|.|.    ||.    ..|.:||:.|.
  Fly    64 SLSNGFYEYPYNCSAYITCYDSCADLEYCPDGKLFNSPLQICDTPGAVDCEPLPYPTPSPTESPP 128

  Fly    66 GYVCVSGSSGVLCQPEDSASDSQADCQECNKC--DETQTFACTGTQSF------------ALCLG 116
            ...|:...:..|.       .|..:|.|...|  |:::.:.|.|...|            ..|.|
  Fly   129 ENPCLGTRNNTLL-------PSAENCNEFYLCVNDQSKVYRCPGEMLFNPDLNICDDKDNVWCYG 186

  Fly   117 TDTVQDSVGT-------------------------CASGYVCNINDT-QICGLPADG-------- 147
            ..|..|.:.|                         |...|.|..|.: .|...|.|.        
  Fly   187 DRTTPDPLDTTTPAEESFTKCEDQEKGTFFPDPENCQQYYYCWGNKSYTILPCPVDNWFNPISGN 251

  Fly   148 ----VMPTCSYSDDSTTTTVSSTTSSTTAAPPST-SSASTYCAAVQSQGKYAVGYNAYTTCRQYI 207
                :.|........|:|....|:||||.||.|| .|....||..:....:.:    .:.|:.|:
  Fly   252 CGPDIAPDACRETTPTSTPTIDTSSSTTVAPTSTEDSVGNPCADQELGASFPI----KSDCQSYL 312

  Fly   208 YCTLVDGSWIGQTYTCPGSMYFDSASEMC-VSTMPSTCSTTATTSSTTTAAPTTSNPEAYCQAMQ 271
            .| |.:|.  ..|..||.:.:||..:..| .:..|:.|   ..:..|||.|.||..|:..|...:
  Fly   313 LC-LNNGE--STTAKCPSNAWFDPKTGDCGPNVSPTAC---LESFETTTTAVTTQAPKDPCADQE 371

  Fly   272 SAGYYPVGTDASTTCHQYIDCFLNGGTWGGNMYTCPGSLYYNSASRTC---VSTLPSTC---STT 330
            ....||:    .|.|.|||.|..||.:...|   |..:.:::..:..|   ||  |:.|   ..|
  Fly   372 LGTSYPL----VTNCQQYILCMGNGESTVAN---CIYNSWFDPQTGNCGPDVS--PTACKESGVT 427

  Fly   331 VASLT 335
            .||.|
  Fly   428 TASPT 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13312NP_648260.1 None
CG7248NP_648530.1 CBM_14 62..113 CDD:426342 9/50 (18%)
CBM_14 136..182 CDD:426342 9/52 (17%)
CBM_14 207..261 CDD:426342 8/53 (15%)
CBM_14 293..347 CDD:426342 14/60 (23%)
CBM_14 367..421 CDD:426342 17/62 (27%)
CBM_14 470..522 CDD:426342
CBM_14 544..597 CDD:426342
CBM_14 630..678 CDD:426342
CBM_14 710..758 CDD:426342
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.