DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13312 and obst-G

DIOPT Version :9

Sequence 1:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:255 Identity:53/255 - (20%)
Similarity:84/255 - (32%) Gaps:52/255 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GTCN---VCNTVNNLTCYSSTQMQSCQVDVLSTATPTDC--PSGYVCV-SGSSGVLCQPEDSASD 86
            |:|.   ||...|.:|       .:|:.:.|.......|  |....|: .|...::.....|.||
  Fly    44 GSCKGYYVCADGNAVT-------GTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSESD 101

  Fly    87 SQADCQECNKCDETQTFACT----GTQSFALCLGTDTVQDSV-----GTCASGYVCNINDTQICG 142
            ...| :|..|.|...|...|    .|....:|.|.   :|.|     |:|...|||......:..
  Fly   102 EDDD-EEMAKTDPPVTVKATKKPRPTTLDKMCAGK---KDGVMLTKNGSCQEYYVCKAKKPHLRS 162

  Fly   143 LP-ADGVMPT---CSYSDDS-----TTTTVSSTTSSTTAAPPSTSSASTYCAAVQSQGKYAVGYN 198
            .| .....||   |..:.::     |.....|...:||....|....::..|.....||:.:   
  Fly   163 CPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATTGGVCSDEKENSLVAHRSDCGKFML--- 224

  Fly   199 AYTTCRQYIYCTLVDGSWIGQTYTCPGSMYFDSASEMCVSTMPSTCSTTATTSSTTTAAP 258
                |...::..:          .||..::|:.|:..|.....:.|.|....|.:.:..|
  Fly   225 ----CSNMMFLVM----------DCPTGLHFNIATSRCDYPKIAKCQTKLNESKSKSKKP 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13312NP_648260.1 None
obst-GNP_648529.1 CBM_14 32..83 CDD:279884 10/45 (22%)
CBM_14 132..184 CDD:279884 13/54 (24%)
CBM_14 204..256 CDD:279884 10/68 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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