DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13312 and CG17826

DIOPT Version :10

Sequence 1:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_648528.1 Gene:CG17826 / 39354 FlyBaseID:FBgn0036227 Length:751 Species:Drosophila melanogaster


Alignment Length:406 Identity:91/406 - (22%)
Similarity:124/406 - (30%) Gaps:134/406 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TCNVCNTVNNLTCYSSTQMQSCQVDVLSTATPTDCPSGYVCVSGSSGVLCQPEDSA--------- 84
            ||.|||. |..||...    ..:||      ||:| :||:..|..:.|..|..|.|         
  Fly   127 TCGVCNG-NGTTCTDG----ELKVD------PTNC-AGYLACSNGNWVSKQCADGAYFNAILETC 179

  Fly    85 -SDSQADCQECNKCDETQTFACTGTQSFALCLGTDTVQDSVGTCASGY-------VCNINDTQIC 141
             .|.:..|..|.:........||   .:.:|.|...|..|   |.|||       ||::::.|..
  Fly   180 VQDDEGICVNCKEGSTKPLADCT---MYEICSGGKYVTKS---CDSGYYWNSQSEVCDVDNGQCN 238

  Fly   142 G---LPADG---VMPT-------CS-------------YSDDSTTTTVSSTTSSTTAAPPSTSSA 180
            |   ...||   |.||       ||             |.:.:..|.|.............::..
  Fly   239 GNGTTCTDGELKVDPTNCAGYLACSNGNWVSKQCADGAYFNVTLETCVQDDEGICVNCKEGSTKP 303

  Fly   181 STYCAAVQ--SQGKYAV-----GY--NAY---------------------------TTCRQYIYC 209
            ...|...:  |.|||..     ||  |:.                           |.|..|:.|
  Fly   304 LADCTMYEICSGGKYVTKSCDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCAGYLAC 368

  Fly   210 TLVDGSWIGQTYTCPGSMYFDSASEMCVSTMPSTCSTTATTSSTTTAAPTT----SNPEAYCQAM 270
            :  :|:|:.:  .|....||::..|.||......| ......||...|..|    .:...|....
  Fly   369 S--NGNWVSK--QCADGAYFNATLETCVQDDEGIC-VNCKEGSTKPLADCTMYEICSGGKYVTKS 428

  Fly   271 QSAGYY-------------------PVGTDAS-----TTCHQYIDCFLNGGTWGGNMYTCPGSLY 311
            ..:|||                   ...||..     |.|..|:.|  :.|.|....  |....|
  Fly   429 CDSGYYWNSQSEVCDVDNGQCNGNGTTCTDGELKVDPTNCAGYLAC--SNGNWVSKQ--CADGAY 489

  Fly   312 YNSASRTCVSTLPSTC 327
            :|:...|||......|
  Fly   490 FNATLETCVQDDEGIC 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13312NP_648260.1 None
CG17826NP_648528.1 CBM_14 36..74 CDD:426342
ChtBD2 <89..124 CDD:214696
CBM_14 145..184 CDD:426342 13/45 (29%)
CBM_14 251..290 CDD:426342 8/38 (21%)
CBM_14 357..396 CDD:426342 12/42 (29%)
CBM_14 463..502 CDD:426342 12/42 (29%)
CBM_14 563..610 CDD:426342
CBM_14 621..670 CDD:426342
CBM_14 697..749 CDD:426342
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.