DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13312 and obst-A

DIOPT Version :10

Sequence 1:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_608378.2 Gene:obst-A / 33022 FlyBaseID:FBgn0031097 Length:237 Species:Drosophila melanogaster


Alignment Length:169 Identity:39/169 - (23%)
Similarity:60/169 - (35%) Gaps:48/169 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NVCNTVNNLTCYSSTQMQS------C--QVDVLSTATPTDCPSGYVCVSGS-------------- 73
            |.|:...|:.|...|::|.      |  :....:...|..|...|.|:.|.              
  Fly    68 NKCDQPFNVDCEDRTELQEPKSSKYCPRKNGFFAHPDPAVCNIFYNCIEGDALETKCTVGLHFDE 132

  Fly    74 -SGVL----------CQPEDSASDSQADC-QECNKCDETQTFAC-------TGTQSFALCLGTDT 119
             ||..          |.||...|::...| ::..|.|:......       |..|.|.:||..:.
  Fly   133 YSGTCVWPDTAKREGCNPEQRTSETGFVCPKDQPKTDDRGQVVTHPKYPHPTDCQKFYVCLNGED 197

  Fly   120 VQDSVGTCASGYVCNINDTQICGLPADGVMPTCS--YSD 156
            .:| :| |..|.|.| :.|::|..|.:  :|.|.  |.|
  Fly   198 PRD-LG-CQLGEVYN-DATEMCDAPEN--VPGCEDWYKD 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13312NP_648260.1 None
obst-ANP_608378.2 CBM_14 27..77 CDD:426342 3/8 (38%)
CBM_14 95..143 CDD:426342 7/47 (15%)
CBM_14 180..225 CDD:426342 15/49 (31%)

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