DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG13312 and cpg-1

DIOPT Version :9

Sequence 1:	NP_648260.1	Gene:	CG13312 / 39010	FlyBaseID:	FBgn0035931	Length:	342	Species:	Drosophila melanogaster
Sequence 2:	NP_001021159.1	Gene:	cpg-1 / 175586	WormBaseID:	WBGene00000465	Length:	584	Species:	Caenorhabditis elegans

Alignment Length:	331	Identity:	79/331 - (23%)
Similarity:	115/331 - (34%)	Gaps:	99/331 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 LLGCLVSSTHGTCNVCNTVNNLTCYSSTQMQSCQVDVLSTATPTDCPSGYVCVSGSSGVL----C 78
            ||..||:|.:....|.....||...::|      :|.....:..|  :|:  |||:..|.    |
Worm     7 LLAFLVASAYAQYGVAGMYENLPLETTT------LDGSGDGSGAD--NGF--VSGADAVAIDTDC 61

  Fly    79 QPEDSASDSQADCQECNKCDETQTFACTGTQSFALCLGTDTVQD-SVGTCASGYVCNINDTQICG 142
            ..::....:...|       ..|...|:|..|..:....|.:.| .:..|...|    |..|..|
Worm    62 STKEDGLYAIGGC-------SPQFLTCSGGISRIMDCPADLIYDPRIVACEYSY----NVPQCGG 115

  Fly   143 LPAD-------------GVMP----------------------TCSYS--DDSTTTTVS------ 164
            :|.|             .|.|                      |.:|:  ||.:|||.:
Worm   116 VPQDVTSTQEAYPSEETTVNPYAPVEEATTTPAEDVTVPEETTTEAYAPVDDYSTTTPAEDVPVP 180

  Fly   165 -STTSS--------TTAAP----PSTSSASTYCAAVQSQGKYAVG--YNAYTTCRQYIYCTLVDG 214
             .||:|        ||.||    |.|.||.|.....::.|.|:.|  .:.||.|.        :|
Worm   181 VETTASPYAPIVPYTTGAPAADEPVTRSAVTKSCVGKADGFYSFGECSDHYTACS--------NG 237

  Fly   215 SWIGQTYTCPGSMYFDSASEMCVSTMPSTCSTTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVG 279
            ..|  ...||..:.||.|..:|...|.....|..:.:...:|..||  ||:..:...|.||   |
Worm   238 YLI--PMQCPARLAFDEARVICDYVMNVPECTNGSGNDEGSADETT--PESSGEMPYSNGY---G 295

  Fly   280 TDASTT 285
            .:.:||
Worm   296 YEETTT 301

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG13312	NP_648260.1	None
cpg-1	NP_001021159.1	CBM_14	61..113	CDD:279884	11/62 (18%)
		CBM_14	214..266	CDD:279884	15/61 (25%)
		CBM_14	<537..576	CDD:279884
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23301
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100