DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13310 and CG14280

DIOPT Version :10

Sequence 1:NP_648257.1 Gene:CG13310 / 39007 FlyBaseID:FBgn0035928 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_650797.1 Gene:CG14280 / 42312 FlyBaseID:FBgn0038695 Length:555 Species:Drosophila melanogaster


Alignment Length:408 Identity:116/408 - (28%)
Similarity:181/408 - (44%) Gaps:72/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PTNSWRDMLFGSKWLTP-----------APRWRESKFLPIFALVPIGPGSCSAPSGE----QGNC 74
            |..:.:::||||    |           |||.:...||.:|.::......||...|:    :|.|
  Fly   184 PHQTLKNILFGS----PIKANLILKKPNAPRSKGKGFLSLFEVIKFPNTKCSVSMGDIRSMEGVC 244

  Fly    75 IPSKDCVLRNGIPAGPCGGGYGVCCIFLQTCGGIIRENSTYFVNPNHPDVYDGTGSCQVTVQKLH 139
            ....:|....|||...|..|.||||:|:..||.:..:...||.:||:|:.......| |.:..:.
  Fly   245 YHEFECKSLGGIPTESCAEGVGVCCVFVNGCGDVTSQQILYFESPNYPNAVREMMIC-VLIINVK 308

  Fly   140 PDICQLRLDLDMFSIAPPEAANHLCNQDQLLISGGSPT---PTICGSSTGDHMYIDAGLGQSNPI 201
            ..:.|||||..||.::.|  :|..|..||.::||.:..   |.:||.:||.|:||..|......:
  Fly   309 KGVQQLRLDFQMFELSRP--SNGDCVDDQFIVSGHNTNFQIPILCGINTGQHIYIHVGDSNEGKV 371

  Fly   202 VLSV---ITSGSFPRLWRIRVTQIHCGSISRADQGCLQYYTAISGRVRSFNYNTVG-------GR 256
            .|||   ::.|.  |.:.|:|||:   ..:.|...||||:....|.::||||:|.|       ..
  Fly   372 YLSVFMKVSGGG--RSFNIKVTQV---DDNLAPNNCLQYFHDAEGVIKSFNYDTDGSIVDNREAT 431

  Fly   257 QLSNQDYSICIRNERNFCGIQYNA------CPDLE-NNRSRSFTLTGNSNNPVATMVGGGGGMPP 314
            ..:|.:|:||:...:|.|.:.||.      .||.: .|:..:      .|:.::....|.|    
  Fly   432 YFNNLNYAICLARLKNVCSVAYNTEQLGGDQPDFQIINKDEA------ENDLISDGQAGAG---- 486

  Fly   315 NLNGCTSDWLLIGCIRSADRIPPLPGCEDRVCGGTFSAEAGMLAKTVQSSVRPFRLYFHTDGVEA 379
             :..|..|::.|..:         |.|.:|...|..|.:..:.|....::..|..|.|.||    
  Fly   487 -IFNCPDDFIAINSV---------PLCGERFNDGRESDDYTIHATVRDTAAGPIILPFRTD---- 537

  Fly   380 PNDIDNRGFCLDYVQQPC 397
             ::...|||.|.|.|:.|
  Fly   538 -SEYVGRGFRLLYKQELC 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13310NP_648257.1 None
CG14280NP_650797.1 PHA03247 126..>233 CDD:223021 14/52 (27%)
CUB 275..391 CDD:238001 38/120 (32%)

Return to query results.
Submit another query.