DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and MYH13

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_003793.2 Gene:MYH13 / 8735 HGNCID:7571 Length:1938 Species:Homo sapiens


Alignment Length:831 Identity:285/831 - (34%)
Similarity:487/831 - (58%) Gaps:1/831 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQ 89
            |..:..:|....:..|:.:|..|::::|.|..||.:||::::||:.::.::|||||||.|....|
Human  1100 DEQVHSLQFQKKIKELQARIEELEEEIEAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQ 1164

  Fly    90 FEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQ 154
            .|.|:||:||..|:|:.||:..|:.|.|...|:||..:.:.:..||::.|.:.|.:.||:|::.:
Human  1165 IEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKQADSVAELGEQIDNLQRVKQKLEKEKSELK 1229

  Fly   155 TEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKD 219
            .|:.::.|.||:.:|.|...|:....:|...||:..|.|:..:.:.|::..::||..:|.||:..
Human  1230 MEIDDMASNIEALSKSKSNIERTCRTVEDQFSEIKAKDEQQTQLIHDLNMQKARLQTQNGELSHR 1294

  Fly   220 VQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARI 284
            |::.:..:..::.||..:..|||:.:|::|:|.:.::.:..:|.....:.|.:|.|.|||.||:.
Human  1295 VEEKESLISQLTKSKQALTQQLEELKRQMEEETKAKNAMAHALQSSRHDCDLLREQYEEEQEAKA 1359

  Fly   285 DLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTR 349
            :|:|.|.|||::...|:.|:.::...|.||:||.::|...|:.|.||:.|:...|..:|||.|.|
Human  1360 ELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEENTETANSKCASLEKTKQR 1424

  Fly   350 LASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTV 414
            |..|||.|:.|||:|:.:|..|.|.....:|...|.|.:|||:....|.:|::.::...:|.:..
Human  1425 LQGEVEDLMRDLERSHTACATLDKKQRNFDKVLAEWKQKLDESQAELEAAQKESRSLSTELFKMR 1489

  Fly   415 HELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAG 479
            :..::|.|....|.||||.|.:::.:....|.|..:.|.|.|...:.:|.|:.:|..|.:|.|..
Human  1490 NAYEEVVDQLETLRRENKNLQEEISDLTEQIAETGKNLQEAEKTKKLVEQEKSDLQVALEEVEGS 1554

  Fly   480 RKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRI 544
            .:.||.:..|:..:.:|.:.:.:|::.|||||||.:::.:....|.|.: |::||.|.:.:..|:
Human  1555 LEHEESKILRVQLELSQVKSELDRKVIEKDEEIEQLKRNSQRAAEALQS-VLDAEIRSRNDALRL 1618

  Fly   545 KKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLA 609
            |||::..:.|:|:.|..:|:...:.||.::....||.:.|.|.:|..|..:...:|.|:.:||..
Human  1619 KKKMEGDLNEMEIQLGHSNRQMAETQKHLRTVQGQLKDSQLHLDDALRSNEDLKEQLAIVERRNG 1683

  Fly   610 GLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEV 674
            .|..||||::..|:...|.:|..|.:..:|:.|:..|.:.|.||::.|.|||.:::...::.|..
Human  1684 LLLEELEEMKVALEQTERTRRLSEQELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVENS 1748

  Fly   675 SKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSK 739
            .:|.|.::|:.:|...:...:.|::.:||:....||.:||:||..||:|..||:|.|..|:.|.|
Human  1749 IQESRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGK 1813

  Fly   740 RIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAK 804
            :.|.|||.|:|:||.||:.|::|.||.:|...|.||.|||:..|.|||.||::.|||.:||..||
Human  1814 KQIQKLENRVRELENELDVEQKRGAEALKGAHKYERKVKEMTYQAEEDHKNILRLQDLVDKLQAK 1878

  Fly   805 INIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            :..|:||..|.|..:....:|.||.|.|||.|.:|||.|||.:|.:|||.|
Human  1879 VKSYKRQAEEAEEQANTQLSRCRRVQHELEEAAERADIAESQVNKLRAKSR 1929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 280/818 (34%)
MYH13NP_003793.2 Myosin_N 36..73 CDD:280832
Myosin_head 88..770 CDD:278492
MYSc_Myh13 100..770 CDD:276887
Actin-binding. /evidence=ECO:0000250 659..681
Actin-binding. /evidence=ECO:0000250 761..775
Myosin_tail_1 850..1927 CDD:279860 282/827 (34%)
RILP-like <1273..1399 CDD:304877 38/125 (30%)
TMPIT 1744..>1837 CDD:285135 35/92 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1917..1938 8/13 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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