DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and MYO2

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_014971.1 Gene:MYO2 / 854504 SGDID:S000005853 Length:1574 Species:Saccharomyces cerevisiae


Alignment Length:1136 Identity:198/1136 - (17%)
Similarity:394/1136 - (34%) Gaps:399/1136 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQ 89
            |..|..|.|........|.:.|:....|.:.::.:.:   .|.|.:..|::.:...:|...|:  
Yeast   302 DTKINGIDDAKEYKITVDALTLVGITKETQHQIFKIL---AALLHIGNIEIKKTRNDASLSAD-- 361

  Fly    90 FEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDK-AKF 153
             |.|.|...|||.:     |.:..::..|    ||  :|||..::.|..|..::|...||. |||
Yeast   362 -EPNLKLACELLGI-----DAYNFAKWVT----KK--QIITRSEKIVSNLNYSQALVAKDSVAKF 414

  Fly   154 QTEVYELL------------------SQIES------------------------YNKEKIVSE- 175
               :|..|                  .||.|                        |..||:..| 
Yeast   415 ---IYSALFDWLVENINTVLCNPAVNDQISSFIGVLDIYGFEHFEKNSFEQFCINYANEKLQQEF 476

  Fly   176 -KHISKLEVSISELNVKIEEL---------NRTVIDISSHR----SRLSQEN------------- 213
             :|:.|||   .|..|| ||:         |:..||:..::    |.|.:|:             
Yeast   477 NQHVFKLE---QEEYVK-EEIEWSFIEFNDNQPCIDLIENKLGILSLLDEESRLPAGSDESWTQK 537

  Fly   214 ------------------------------IELTKDVQD-LKVQLDTVSFSKSQVISQ------- 240
                                          :::..||:. ::...||||....:|:..       
Yeast   538 LYQTLDKSPTNKVFSKPRFGQTKFIVSHYALDVAYDVEGFIEKNRDTVSDGHLEVLKASTNETLI 602

  Fly   241 -----LEDARRRLEDEDR------------------RRSLLESSLHQVEIELDSVRNQLEEESEA 282
                 ||.|.::||:..:                  |:..|.|...|..|||   .|.:...:..
Yeast   603 NILEGLEKAAKKLEEAKKLELEQAGSKKPGPIRTVNRKPTLGSMFKQSLIEL---MNTINSTNVH 664

  Fly   283 RIDLERQLVKANADATSWQ---------------------------NKWNSE------------- 307
            .|    :.:|.|||..:||                           ::|..|             
Yeast   665 YI----RCIKPNADKEAWQFDNLMVLSQLRACGVLETIRISCAGFPSRWTFEEFVLRYYILIPHE 725

  Fly   308 ----VAARAEEVEE---------------IRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASE 353
                :..:.|..||               .:.|||:..|:       :..|...|..::...:::
Yeast   726 QWDLIFKKKETTEEDIISVVKMILDATVKDKSKYQIGNTK-------IFFKAGMLAYLEKLRSNK 783

  Fly   354 VEVLIIDLEKS------NNSCRELTKSVNTLEKHNVE---LKSRLDETIILYETSQRDLKNKHAD 409
            :...|:.::|.      .....::::::..|: :|::   ::.|:::          ::|...|.
Yeast   784 MHNSIVMIQKKIRAKYYRKQYLQISQAIKYLQ-NNIKGFIIRQRVND----------EMKVNCAT 837

  Fly   410 LVRTVHELDKVKDN----NNQLTRENKKLGDDL--------HEAKGAINELNRRLHELELELRRL 462
            |::..:....::.|    ...:|...||:..:|        ||...|:. :..::...|...|.|
Yeast   838 LLQAAYRGHSIRANVFSVLRTITNLQKKIRKELKQRQLKQEHEYNAAVT-IQSKVRTFEPRSRFL 901

  Fly   463 ENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLN 527
            ..::|.:..   ::...|:|.:::.::|.||.....|                .|:.|.::|.  
Yeast   902 RTKKDTVVV---QSLIRRRAAQRKLKQLKADAKSVNH----------------LKEVSYKLEN-- 945

  Fly   528 ARVIEAETRLKTEVTRIK------KKLQIQITE------------LEMSLDVANK--TNIDLQKV 572
             :|||....|.::|...|      |:||:|:.|            .|..:|:.|:  .:::|||.
Yeast   946 -KVIELTQNLASKVKENKEMTERIKELQVQVEESAKLQETLENMKKEHLIDIDNQKSKDMELQKT 1009

  Fly   573 I-----------KKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLA---GLNGELE-EVRSHL 622
            |           |...|:|.::...:::::.:.:..|::....::.|.   .|||:|: ||:|..
Yeast  1010 IENNLQSTEQTLKDAQLELEDMVKQHDELKEESKKQLEELEQTKKTLVEYQTLNGDLQNEVKSLK 1074

  Fly   623 DSANRAKRTVEL---------------QYEEAASRINELTTANVSL----VSIKSKL-----EQE 663
            :...|.:..:.|               .....||..|.:...|..|    :::||:.     ...
Yeast  1075 EEIARLQTAMSLGTVTTSVLPQTPLKDVMGGGASNFNNMMLENSDLSPNDLNLKSRSTPSSGNNH 1139

  Fly   664 LSVVASDYEEVSKELRISDERYQKVQ------VELKHVVEQVHEEQERIVKLETIKKSLEVEVKN 722
            :..::.|.|......:|::|.|:.::      .|:...:.:..|..:..|.::..|:.:....:.
Yeast  1140 IDSLSVDRENGVNATQINEELYRLLEDTEILNQEITEGLLKGFEVPDAGVAIQLSKRDVVYPARI 1204

  Fly   723 LSIRLEEV-ELNAVAGSKRIISKLEARIRDLELELE-------------EEKRRHAETIKILRK- 772
            |.|.|.|: .......|:..::::...|:.:..:|:             ..:..::..:..|.. 
Yeast  1205 LIIVLSEMWRFGLTKQSESFLAQVLTTIQKVVTQLKGNDLIPSGVFWLANVRELYSFVVFALNSI 1269

  Fly   773 -KERTVKEVLVQCEEDQKNLILLQDAL--DKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELE 834
             .|.|.|..:.  :|:.|..:.|...|  |......|||...|              ::.|::|:
Yeast  1270 LTEETFKNGMT--DEEYKEYVSLVTELKDDFEALSYNIYNIWL--------------KKLQKQLQ 1318

  Fly   835 AAEDRADTAESSLNIIRAKHRTFVTTSTVPG 865
                     :.::|.:       |.:.::||
Yeast  1319 ---------KKAINAV-------VISESLPG 1333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 191/1113 (17%)
MYO2NP_014971.1 COG5022 2..1567 CDD:227355 198/1136 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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