DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and MYO4

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_009373.1 Gene:MYO4 / 851204 SGDID:S000000027 Length:1471 Species:Saccharomyces cerevisiae


Alignment Length:940 Identity:175/940 - (18%)
Similarity:344/940 - (36%) Gaps:278/940 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LKLRKLLEDVHLESEETTL-----------------LLKKKHNEIITDFQEQVEILTKNKARAEK 148
            ::::....|..|.|||..|                 ::||   :|:|..::.|..|..|:|...:
Yeast   346 IEMKMTRNDASLSSEEQNLQIACELLGIDPFNFAKWIVKK---QIVTRSEKIVTNLNYNQALIAR 407

  Fly   149 DK-AKF------------------------QTEVYELLSQIESYNKEKIVSEKHISKLEVSISEL 188
            |. |||                        |..|:..:..::.|..|..  ||: |..:..|:..
Yeast   408 DSVAKFIYSTLFDWLVDNINKTLYDPELDQQDHVFSFIGILDIYGFEHF--EKN-SFEQFCINYA 469

  Fly   189 NVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDR 253
            |.|:::      :.:.|..:|.||  |..|:    :::...:.||.:|...              
Yeast   470 NEKLQQ------EFNQHVFKLEQE--EYVKE----EIEWSFIEFSDNQPCI-------------- 508

  Fly   254 RRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKW--------NSEVAA 310
              .|:|:.|        .:.:.|:|||.         :.:.:| .||.:|.        ::||.:
Yeast   509 --DLIENKL--------GILSLLDEESR---------LPSGSD-ESWASKLYSAFNKPPSNEVFS 553

  Fly   311 --RAEEVEEIRRKYQVRITELEEHIESLI------VKVNNLEKMKTRLASEVEVLIIDLEKSNNS 367
              |..:.:.|...|.|   ::|..:|..|      |.:.:|:..|. ..:.:...|:|       
Yeast   554 KPRFGQTKFIVSHYAV---DVEYEVEGFIEKNRDSVSLGHLDVFKA-TTNPIFKQILD------- 607

  Fly   368 CRELTKSVNTLEKHNVELKSRLDETIILYETSQRD------LKNKHADLV-----RTVHELDKVK 421
            .||| :|.:..|:.|.|.|     .:|....||:.      .|....:|:     ..||.:..:|
Yeast   608 NREL-RSDDAPEEQNTEKK-----IMIPARLSQKKPTLGSMFKKSLGELMAIINSTNVHYIRCIK 666

  Fly   422 DNN-------------NQL----TRENKKLGDDLHEAKGAINELNRR-------------LHELE 456
            .|:             :||    ..|..::......::...:|..:|             |:..:
Yeast   667 PNSEKKPWEFDNLMVLSQLRACGVLETIRISCAGFPSRWTFDEFVQRYFLLTDYSLWSGILYNPD 731

  Fly   457 LELRRLENERDEL-------TAAYKEA------EAGRKA--EEQRGQRLAADFNQYRHDAERRLA 506
            |....:.|....:       :|.|:..      :||..|  |:.|..::    |:.....::::.
Yeast   732 LPKEAIVNFCQSILDATISDSAKYQIGNTKIFFKAGMLAFLEKLRTNKM----NEICIIIQKKIR 792

  Fly   507 EKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEV-TRIKKKLQIQITEL--------------- 555
            .:...::.::...||:..|...|.:...||:..|: ||....||..|..|               
Yeast   793 ARYYRLQYLQTMESIKKCQSQIRSLLVRTRVDHELKTRAAILLQTNIRALWKREYYRAAIGQIIK 857

  Fly   556 -------EMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQ---LQATLDQYAVAQRRLAG 610
                   ::.||..|:..:.:..||.:..::....:..|..::|.   :|:.: :..:|:||...
Yeast   858 LQCTCKRKLILDSVNRKFMLMAAVIIQSYIRSYGHKTDYRTLKRSSILVQSAM-RMQLARRRYIV 921

  Fly   611 LNGELEE--VRSH-----LDSANRAKRTVELQYE---EAASRINELTTANVSLVSIKSKLEQELS 665
            |..|:||  :|:.     |:.|...|.:..|..|   ::.:|:.:|...::|  :|.||..||..
Yeast   922 LQKEVEERNIRASYGIGLLEEAIEFKNSFILNLEMLNDSYTRLTQLLQGDLS--NIPSKQRQEYE 984

  Fly   666 VVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEV 730
            .:.:.|.:...:|:       .:|||:.:.:.:.:..:||..|..::            |:....
Yeast   985 TIVNGYNDKISKLK-------TLQVEIMNTLNKKNALKERKKKQSSL------------IQSHMQ 1030

  Fly   731 ELNAVAGSKRIISKLEARIRDLELEL---EEEKRRHAETIKILRKKERT---------VKEVLVQ 783
            .|.|:.|:|.  |:|...::.::.||   |....:...|.....|.::.         ||..||.
Yeast  1031 SLAAIKGNKP--SRLSDEVKSMKQELAFIENVIAQDFTTTYSANKNDKVKGLGIAGQQVKPKLVN 1093

  Fly   784 -CEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSL 847
             ...:..|..||:..:|     :|.|..:::|             .:.:::...|...|.....:
Yeast  1094 VIRRESGNPDLLELLMD-----LNCYTLEVTE-------------GYLKKVNVTEVNGDNVLGPI 1140

  Fly   848 NIIRAKHRTFVTTSTVPGSQVYIQETTRTI 877
            ::|.....:.|....:..|..:|.:...|:
Yeast  1141 HVITTVVSSLVRNGLLIQSSKFISKVLLTV 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 171/914 (19%)
MYO4NP_009373.1 COG5022 2..1471 CDD:227355 175/940 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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