DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and CGNL1

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_005254783.1 Gene:CGNL1 / 84952 HGNCID:25931 Length:1303 Species:Homo sapiens


Alignment Length:885 Identity:207/885 - (23%)
Similarity:379/885 - (42%) Gaps:187/885 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RATSTGP--GTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSE 77
            |||:|.|  |...::::.....|:.....|.       |:.::||.|:...|.|.   |::....
Human   509 RATATSPDSGAKKISVKTFPSASNTQATPDL-------LKGQQELTQQTNEETAK---QILYNYL 563

  Fly    78 RLEEAEGGAEHQFEANRKRDAELLKLRKLL-----------EDVHLESEETTLLLKKKHNEI-IT 130
            :    ||..::.....||.:....|::.|.           :..:..||...||.:|....| :.
Human   564 K----EGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQACNSTSEVKDLLEQKSKLTIEVA 624

  Fly   131 DFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHI-SKLEVSISELNVKIEE 194
            :.|.|:::..||:...::::.:.:..:.||.||    :.||:.....: .:||.|..||...:||
Human   625 ELQRQLQLEVKNQQNIKEERERMRANLEELRSQ----HNEKVEENSTLQQRLEESEGELRKNLEE 685

  Fly   195 LNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLE 259
            |.:..::...|::           :::||:.||       |::..:|:.|:|   .|||.:..|.
Human   686 LFQVKMEREQHQT-----------EIRDLQDQL-------SEMHDELDSAKR---SEDREKGALI 729

  Fly   260 SSLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQV 324
            ..|.|.:.:|..:....||:.:.....||:|       |:.:.....||::..:|:::::.:|..
Human   730 EELLQAKQDLQDLLIAKEEQEDLLRKREREL-------TALKGALKEEVSSHDQEMDKLKEQYDA 787

  Fly   325 RITELEE-------HIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHN 382
            .:..|.|       ::|.|..:.|..|:.:......|::|..:.||......||.:.|..|::..
Human   788 ELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQI 852

  Fly   383 VELK---SRLDETIILYETSQRDL---------KNKHADLVRTV--HELDKVKDNNNQLTRENKK 433
            .:||   ::..||:..||...|.|         :.|.|...|..  :||:..:.|.:|.|:|.|:
Human   853 EDLKGDEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQ 917

  Fly   434 LGDDLHEAKGAINELNRRLHELELE-------LRRLENERDELTAAYKEAEAGRKAEEQRGQRLA 491
            |.:.|.|......:|.|..:|:|.|       :.:|:.|..::      .||.|.:..:    |.
Human   918 LSEKLKEESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADI------VEASRTSTLE----LQ 972

  Fly   492 ADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELE 556
            ...::|:....|.|||..              .||..:.:|||   |:.:|.:|.:.::::.|.|
Human   973 NQLDEYKEKNRRELAEMQ--------------RQLKEKTLEAE---KSRLTAMKMQDEMRLMEEE 1020

  Fly   557 MSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSH 621
            :                              .|.||.....|.:..:.::.|..|..|| |.:||
Human  1021 L------------------------------RDYQRAQDEALTKRQLLEQTLKDLEYEL-EAKSH 1054

  Fly   622 L-DSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERY 685
            | |..:|..:.:|.:.                     |:||.||....::.:.:|:  |||..|.
Human  1055 LKDDRSRLVKQMEDKV---------------------SQLEMELEEERNNSDLLSE--RISRSRE 1096

  Fly   686 QKVQVELKHVVEQVHEE--QERIVK--LETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLE 746
            |         :||:..|  |||..:  ||..|.|||.:.|:|..|:..:|.:..:..:.::.::|
Human  1097 Q---------MEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEGLVVQME 1152

  Fly   747 ARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQ 811
            |||.:||..||.|:|..|......|:.||.|||:::|.:::.   :.|.|..|:.:.::...:||
Human  1153 ARIAELEDRLESEERDRANLQLSNRRLERKVKELVMQVDDEH---LSLTDQKDQLSLRLKAMKRQ 1214

  Fly   812 LSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIR 851
            :.|.|....:..:..::.|||||...|..:..:..||.::
Human  1215 VEEAEEEIDRLESSKKKLQRELEEQMDMNEHLQGQLNSMK 1254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 201/864 (23%)
CGNL1XP_005254783.1 Myosin_tail_1 <615..1257 CDD:460256 182/765 (24%)

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