DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and myhz1.2

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_005171981.1 Gene:myhz1.2 / 799300 ZFINID:ZDB-GENE-070705-73 Length:1937 Species:Danio rerio


Alignment Length:833 Identity:294/833 - (35%)
Similarity:493/833 - (59%) Gaps:9/833 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSL-SRLEDKIRLLQ-------DDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAE 87
            |:|..|| ::|:.||:.||       :::|.||..|.::|:::||||.::.::|||||||.|...
Zfish  1096 IEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEISERLEEAGGATA 1160

  Fly    88 HQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAK 152
            .|.|.|:||:||..|||:.||:..|:.|.|...|:||..:.:.:..||::.|.:.|.:.||:|::
Zfish  1161 AQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSE 1225

  Fly   153 FQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELT 217
            ::.|:.:|.|.:|:..|.|...||....||..:||:..|.:|..|.:.|:|:.|:||..||.|..
Zfish  1226 YKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENLRQLNDLSAQRARLQTENGEFG 1290

  Fly   218 KDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEA 282
            :.:::.:..:..::..|.....|:|:.:|::|:|.:.::.|..::.....:.|.:|.|.|||.||
Zfish  1291 RQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEA 1355

  Fly   283 RIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMK 347
            :.:|:|.:.|||::...|:.|:.::...|.||:||.::|...|:.|.||.||::..|..:|||.|
Zfish  1356 KAELQRGMSKANSEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTK 1420

  Fly   348 TRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVR 412
            .||..|||.|:||:|::|.....|.|.....:|...|.|.:.:|.....|.:|::.::...:|.:
Zfish  1421 QRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAELEGAQKEARSLSTELFK 1485

  Fly   413 TVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAE 477
            ..:..::..|....|.||||.|..::.:....|.|..:.:||||...:.:|.|:.|:..|.:|||
Zfish  1486 MKNSYEETLDQLETLKRENKNLQQEISDLTEQIGETGKSIHELEKSKKAVETEKAEIQTALEEAE 1550

  Fly   478 AGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVT 542
            ...:.||.:..|:..:.||.:.:.:|:|||||||||.| |:.|..|.......:::|.|.:.:..
Zfish  1551 GTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQI-KRNSQRITDSMQSTLDSEVRSRNDAL 1614

  Fly   543 RIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRR 607
            |||||::..:.|:|:.|..||:...:.||.::....||.:.|.|.:|..|..:...:|.|:.:||
Zfish  1615 RIKKKMEGDLNEMEIQLSHANRQAAEAQKQLRNVQAQLKDAQLHLDDAVRGQEDMKEQVAMVERR 1679

  Fly   608 LAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYE 672
            ...:..|:||:|:.|:...|.::..|.:..:|:.|:..|.:.|.||::.|.|||.:|..:.|:.|
Zfish  1680 NTLMQSEIEELRAALEQTERGRKVAEQELVDASERVGLLHSQNTSLLNTKKKLEADLVQIQSEVE 1744

  Fly   673 EVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAG 737
            :..:|.|.::::.:|...:...:.|::.:||:....||.:||:|||.||:|..||:|.|..|:.|
Zfish  1745 DTVQEARNAEDKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAENLAMKG 1809

  Fly   738 SKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKST 802
            .|:.:.|||:|:|:||.|:|.|:||.|:.:|.:||.||.|||:..|.|||:||:..|||.:||..
Zfish  1810 GKKQLQKLESRVRELESEVEAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNVNRLQDLVDKLQ 1874

  Fly   803 AKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            .|:..|:||..|.|..:....:::|:.|.|||.||:|||.|||.:|.:|||.|
Zfish  1875 LKVKAYKRQSEEAEEQANSHLSKLRKVQHELEEAEERADIAESQVNKLRAKSR 1927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 289/826 (35%)
myhz1.2XP_005171981.1 Myosin_N 33..78 CDD:460670
MYSc_class_II 101..768 CDD:276951
Myosin_tail_1 848..1925 CDD:460256 291/829 (35%)
Blue background indicates that the domain is not in the aligned region.

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