DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Myh14

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001258467.1 Gene:Myh14 / 71960 MGIID:1919210 Length:2033 Species:Mus musculus


Alignment Length:875 Identity:218/875 - (24%)
Similarity:404/875 - (46%) Gaps:48/875 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RATSTGPGTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERL 79
            ||...|...|       |.|.||...:..:...|:|||.||..|.:.|:::.||..::..:...|
Mouse  1152 RAEEEGGARA-------QLLKSLREAQAGLAEAQEDLEAERVARAKAEKQRRDLGEELEALRGEL 1209

  Fly    80 EEAEGGAEHQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKA 144
            |:.......|.|...||:.|:.:|:|.||:.....|.:...|:::|::.:.:..||:|...:.|.
Mouse  1210 EDTLDSTNAQQELRSKREQEVTELKKALEEESRAHEVSMQELRQRHSQALVEMAEQLEQARRGKG 1274

  Fly   145 RAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVK-----------IEELNRT 198
            ..||.:...:.||.||.:::.|....:...|:...:||..:.|:..:           .|:|.|.
Mouse  1275 VWEKTRLSLEAEVSELKAELSSLQTSRQEGEQKRRRLESQLQEVQGRSSDSERARSEAAEKLQRA 1339

  Fly   199 VIDISSHRSRLSQ---ENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLES 260
            ..::.|..:.||:   :.|.|.|::              |...|||.|.:..|::|.|.:..|.|
Mouse  1340 QAELESVSTALSEAESKAIRLGKEL--------------SSAESQLHDTQELLQEETRAKLALGS 1390

  Fly   261 SLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVR 325
            .:..:|.|...:|.|:|||..||....|:|....|..:.|:.: ..|.||..|..||.||:....
Mouse  1391 RVRALEAEAAGLREQMEEEVVARERAGRELQSTQAQLSEWRRR-QEEEAAVLEAGEEARRRAARE 1454

  Fly   326 ITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLD 390
            ...|.:.:......|..||:.:.||..|::...:||.:.......|.|.....::...|.|:.:.
Mouse  1455 AETLTQRLAEKTEAVERLERARRRLQQELDDATVDLGQQKQLLSTLEKKQRKFDQLLAEEKAAVL 1519

  Fly   391 ETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHEL 455
            ..:...|..:.:.:.:.|..:.....|::.::...:|.|:|:.|..:|.....:.:::.:.:|||
Mouse  1520 RAVEDRERIEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKNVHEL 1584

  Fly   456 ELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTS 520
            |...:..|....:|.....|.|....|.|....||.......:...||.|..:|:..|..|:|.:
Mouse  1585 ERARKAAEQAASDLRTQVTELEDELTAAEDAKLRLEVTVQALKAQHERDLQGRDDAGEERRRQLA 1649

  Fly   521 IEIEQLNARVIEAETRLKTEVTRI--KKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTEL 583
               :||....:|.:...|.....:  :|||::::.||:.....|.:...:..|.:||..:|:.||
Mouse  1650 ---KQLRDAEVERDEERKQRALAMAARKKLELELEELKAQTSAAGQGKEEAVKQLKKMQVQMKEL 1711

  Fly   584 QAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTT 648
            ....|:.:.............:::|.||..|:..::..|.:::||:|..:...:|.|..:.....
Mouse  1712 WREVEETRSSRDEMFTLSRENEKKLKGLEAEVLRLQEELAASDRARRQAQQDRDEMAEEVASGNL 1776

  Fly   649 ANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIK 713
            :..:.:..|.:||..||.:..:.||......:..:.|:|:.::::.:..::..|:....|.|:.:
Mouse  1777 SKAATLEEKRQLEGRLSQLEEELEEEQNNSELLKDHYRKLVLQVESLTTELSAERSFSAKAESGR 1841

  Fly   714 KSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVK 778
            :.||.:::.|..||.|.:..|.|..|.:|:.||:::...|.:||:|.|....:.|::|:.|:.:|
Mouse  1842 QQLERQIQELRARLGEEDAGARARQKMLIAALESKLAQAEEQLEQESRERILSGKLVRRAEKRLK 1906

  Fly   779 EVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTA 843
            ||::|.:|:::....::|.|:||..::...:|||.|.|..:.:.....||.|||||...:.|::.
Mouse  1907 EVVLQVDEERRVADQVRDQLEKSNLRLKQLKRQLEEAEEEASRAQAGRRRLQRELEDVTESAESM 1971

  Fly   844 ESSLNIIRAKHR----TFVTTSTVPGSQVY 869
            ...:..:|.:.|    || ||.||  .||:
Mouse  1972 NREVTTLRNRLRRGPLTF-TTRTV--RQVF 1998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 204/834 (24%)
Myh14NP_001258467.1 Myosin_head 104..825 CDD:278492
MYSc_Myh14_mammals 115..825 CDD:276893
Myosin_tail_1 902..1982 CDD:279860 209/854 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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