DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Myh15

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001159682.1 Gene:Myh15 / 667772 MGIID:3643515 Length:1925 Species:Mus musculus


Alignment Length:843 Identity:258/843 - (30%)
Similarity:467/843 - (55%) Gaps:24/843 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VNIEYIQDLSSLSRLEDKIRLLQ-------DDLEVERELRQRIEREKADLSVQVIQMSERLEEAE 83
            :|.:...:.:.:|:|:..::.||       ::||.||.:|.::||||.||...:..::||||||.
Mouse  1081 MNSKVENEKNQVSQLQKMVKELQTHILNLKEELESERTIRAKVEREKGDLVQDLEDLNERLEEAG 1145

  Fly    84 GGAEHQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEK 148
            |.:..|.|..::::|...||...:|:.....|.|:..|||:|.|.:.:.:.|||.|.:.:...|:
Mouse  1146 GTSLAQMEITKQQEARFQKLHHDMEETTRHFEATSASLKKRHAENLAELEGQVEHLQQVRLVLEQ 1210

  Fly   149 DKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQEN 213
            ||:..|.:|.:||::::...:.|..:||.....|..::|.|.|::|:.:...|:::.:::|..|:
Mouse  1211 DKSDLQLQVDDLLNRVDQMARAKANAEKLCGLYERRLNEANTKLDEVTQLAHDLTTQKTKLQSES 1275

  Fly   214 IELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEE 278
            .|..|.:::.:..:..:|..||....|:|:.|.:||:|.|.:|.|..:|...:.:.|.:|.|.||
Mouse  1276 GEFFKRLEEKEALISQLSREKSNFTRQVEELRAQLEEESRSQSALSHALQSAKHDYDLLREQYEE 1340

  Fly   279 ESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNL 343
            |.|.:.:|.|.|.|.|.:...|:.|:..:...|.|::||.::|..:|:.|..|.:|....|..:|
Mouse  1341 EQEVKAELHRALSKGNKETVQWRAKYEHDAMQRTEDLEEAKKKLAIRLQEAAEAMEVSNAKNASL 1405

  Fly   344 EKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHA 408
            |:.:.||..|:...:.||.|:.:....|.:.....:|.....|.:||||..|.:.||::.:...:
Mouse  1406 ERARHRLQLELGDALSDLGKARSVAAALGQKQQHSDKALTSWKQKLDETQELLQASQKETRALSS 1470

  Fly   409 DLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAY 473
            :::......::..:....|.|:|:.|.:.:......:.|..:.|.|:|...:.:|.|:.|:....
Mouse  1471 EVLTFRQACEESTEAQETLKRQNQDLQEQICSLTNQVREGIKNLAEVEKAKKLIEQEKTEVQVRL 1535

  Fly   474 KEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARV-IEAETRL 537
            :|.|...:..|.:..|...:.::.:.:.||:|:||:||.|.:|::....:..|.:.: :||.:|:
Mouse  1536 EETEGALERNESKILRFQLELSEAKAELERKLSEKEEEAERLREKHQQAMGSLQSNLDLEASSRI 1600

  Fly   538 KTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATL---- 598
              |.||::||::..:.|:|:.|..||:.       :.:.:..|.:||...:|:.:||..::    
Mouse  1601 --EATRLRKKMEGDLKEMEIQLCAANRQ-------VSQMTRALGQLQGQMKDLHQQLDDSIYQNK 1656

  Fly   599 ---DQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKL 660
               :|.|:|::|...|..||||:|:..:...|.::..|.:..||..|||...|.|.||:|.|.||
Mouse  1657 DLKEQVALAEQRTVLLQSELEELRTLQEQTERGRKLAEKELLEATERINLFHTQNTSLLSQKKKL 1721

  Fly   661 EQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSI 725
            |.:::.|..:..|:.:..:.::|:.:|...|..::.|::.:||:....||.::|::|..:|:|..
Mouse  1722 EADVAQVQKEAGEMLQACQKAEEKAKKTAAEAANMSEELKKEQDTNAHLERMRKNMEQTIKDLQK 1786

  Fly   726 RLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKN 790
            ||:|.|..||.|||:.|.|||:|:||||.|||.|.||.||..:..|:.||.:||:..|.|||:||
Mouse  1787 RLDEAEQTAVLGSKKQIQKLESRVRDLEGELESEVRRSAEAQREARRLERGIKELTYQAEEDKKN 1851

  Fly   791 LILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAK 853
            |..:|...||...|:..|::|:...|..:.|..::.::.|.||..|::||:.|||.:|.:|||
Mouse  1852 LSRMQALSDKLQLKVQSYKQQVEAAEAQANQYLSKYKKQQHELNEAKERAEAAESQVNKLRAK 1914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 255/833 (31%)
Myh15NP_001159682.1 Myosin_N 31..69 CDD:280832
Myosin_head 84..757 CDD:278492
MYSc_Myh15_mammals 96..757 CDD:276892
Myosin_tail_1 838..1914 CDD:279860 256/841 (30%)
NBP1 <1004..>1136 CDD:285709 16/54 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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