DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and myh7bb

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_009295034.2 Gene:myh7bb / 560945 ZFINID:ZDB-GENE-090311-5 Length:1935 Species:Danio rerio


Alignment Length:853 Identity:275/853 - (32%)
Similarity:503/853 - (58%) Gaps:11/853 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RSSKYSYRATSTGPGTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQV 72
            |..|..:.....|....:.....||....:..|:.:|..|:::||.||..|.:.|::::|:|.::
Zfish  1080 RLKKKDHEMVQIGAKIEEEQALVIQLHKKIKELQTRIEELEEELEAERAARSKSEKQRSDVSREL 1144

  Fly    73 IQMSERLEEAEGGAEHQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVE 137
            .::|||||||.|....|.|.|:||:|:.:|||:.||:..|..|.|..:|::||.:.:.:..||::
Zfish  1145 EELSERLEEAGGATTAQIEMNKKREADFIKLRRDLEEASLHHETTIAMLRRKHADTVAEMGEQLD 1209

  Fly   138 ILTKNKARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDI 202
            .|.:.|.:.||:||:.:.|..:|.|.:|..::.|..:||.....|..::|...|||||.|.::|:
Zfish  1210 NLQRVKQKLEKEKAETRMECEDLASNVEHLSRAKTTTEKMCRMYEDQLNESKTKIEELQRQLMDV 1274

  Fly   203 SSHRSRLSQENIELT-----KDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSL 262
            :|.::|...|:.|::     |:|..:::|...::||::     :|:.:::||:|.:.::.|..::
Zfish  1275 TSQKARAQTESAEVSRRLEEKEVLVMQLQRTKIAFSQT-----VEELKKQLEEESKAKNSLAHAV 1334

  Fly   263 HQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRIT 327
            .....:.|.:|.|.|||.||:.:|:|.|.|||.:...|:.|:.::...|.:|:|:.::|...|:.
Zfish  1335 QSSRHDCDLLREQFEEEQEAKSELQRALSKANIEIAQWRTKYETDAIQRTDELEDAKKKLVARLQ 1399

  Fly   328 ELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDET 392
            ..||.:|:...|..:|||.|.||.:|:|.|::|||:||.....|.|.....:|...|.:.:.:||
Zfish  1400 GSEEAVEASNAKCASLEKTKHRLQTEIEDLMVDLERSNAVAIALDKKQRNFDKVLSEWRQKFEET 1464

  Fly   393 IILYETSQRDLKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELEL 457
            ....|.||::.::...:|.:..:..::..|....:.||||.|.:::.:....|::.|:.:||||.
Zfish  1465 QSELEGSQKESRSLSTELFKLKNSYEEALDQLETIKRENKNLQEEITDLTDQISQGNKTIHELEQ 1529

  Fly   458 ELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIE 522
            ..:.|::|:.::.||.:|||...:.||.:..|:..:.:|.:.:.|::|||:||||:.:|:.....
Zfish  1530 MKKVLDHEKCDIQAALEEAEGTLEHEESKTLRVQLELSQTKTEVEKKLAERDEEIDNLRRNHQRT 1594

  Fly   523 IEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHY 587
            :|.:.. .::||||.:.|..|:|||::..:.|:|:.|:.||:..::.||:::...||:.:||...
Zfish  1595 LEGMQT-TLDAETRARNEAIRVKKKMENDMNEMEIHLNHANRQAVESQKMVRNLQLQIKDLQVEL 1658

  Fly   588 EDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVS 652
            ::.....:...:|.||.:||...|:.||||:|...:..:|.::..|.:..|::.|:|.|...|..
Zfish  1659 DESMHHCEELKEQVAVTERRNTLLSAELEELRGVAEQTDRMRKVAEHELLESSERVNLLHAQNTV 1723

  Fly   653 LVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLE 717
            :::.|.|||.:||:::.:.::..:|.|.::|:.:|...:...:.|::.:||:....||.:|:::|
Zfish  1724 MLNQKKKLESDLSMLSGEVDDAQQECRNAEEKAKKAITDAAMMAEELKKEQDTSSHLERMKRNME 1788

  Fly   718 VEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLV 782
            ..:|:|..||:|.|..|:.|.|:.|.|:|.|:|:||.||:.|:::.||..|.:||.||.:||:..
Zfish  1789 QTIKDLQNRLDEAEQIALKGGKKQIQKMEIRVRELETELDCEQKKSAEFQKGIRKYERRIKELTY 1853

  Fly   783 QCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSL 847
            |.|||:|.|:.:||.:||..||:..::||..:.|.......||.|:.|.:|:.||:|||.|||.:
Zfish  1854 QTEEDRKTLLRMQDLIDKLQAKVKSFKRQAEDAEEQVNCNMTRFRKIQHDLDEAEERADMAESQV 1918

  Fly   848 NIIRAKHR 855
            |.:|.:.|
Zfish  1919 NKLRVRTR 1926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 269/823 (33%)
myh7bbXP_009295034.2 Myosin_N 33..77 CDD:460670
Motor_domain 100..767 CDD:473979
Myosin_tail_1 847..1924 CDD:460256 274/849 (32%)
Blue background indicates that the domain is not in the aligned region.

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