DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myo18ab

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_021322097.1 Gene:myo18ab / 559005 ZFINID:ZDB-GENE-080423-1 Length:2267 Species:Danio rerio


Alignment Length:865 Identity:184/865 - (21%)
Similarity:388/865 - (44%) Gaps:141/865 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANR----KRD 97
            |::...:..::.|:.....||.:.:|.||:...:.:.::..|     .|...:.|.||    :|:
Zfish  1327 LTKKHGRNYIVTDEKRAVEELLESLELEKSSYHMGLSRVFFR-----AGVLAKLEENRDIQTRRN 1386

  Fly    98 AEL-------------LKLRKLLEDVHLESEETTLLLKKKHN-------EIITDFQEQVEI-LTK 141
            ..|             .|.|| ::|:.:...:..  :||...       ::.|..:..:|: ||:
Zfish  1387 LTLFQAACRGYLARQAFKKRK-IQDLAIRCIQKN--IKKNRGVKGWPWWKLFTTVRPLIEVQLTE 1448

  Fly   142 NKARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHR 206
            .:.|. ||:     |:..|.|::|...||:.....:..:||..|:||:.::.:...|....|...
Zfish  1449 EQIRG-KDE-----EIQLLKSKLEKVEKERNELRLNSDRLESKITELSSELADERNTGESASQLL 1507

  Fly   207 SRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLEDAR--------RRLEDED---RRRSLLES 260
            ...:.|.:.|.||::||:.:.|.:......:..::.:||        ..::|:|   ..|...|.
Zfish  1508 ESETSERLRLEKDMKDLQAKFDAMKKQTESMEMEVMEARLIRASELNGEMDDDDTGGEWRLKYER 1572

  Fly   261 SLHQVEI-------ELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEI 318
            ::.::|.       |.|   ::||.|.:.:..|||:|....||        |.||...|   :::
Zfish  1573 AIREIEFTKKRLQQEFD---DKLEVEQQNKRQLERKLTDLQAD--------NEEVQRVA---QQL 1623

  Fly   319 RRKYQVRITELEE---HIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEK 380
            ::|.|....||::   |:|....:.::|||.:.:..||......::::..:...:|::..:.|..
Zfish  1624 KKKCQRLTAELQDTKLHLEGQQSRNHDLEKKQRKFDSEQTQAQEEVQREKSQREKLSREKDMLTG 1688

  Fly   381 HNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAI 445
            ....|:.:|::         :||            |:..|.....|:..|.:.|.....:.:.::
Zfish  1689 EVFSLRQQLED---------KDL------------EICAVNLKLEQMEAELQDLNSQESKDEASL 1732

  Fly   446 NELNRRLHELELELRRLENERDELTAAYKEAEAGR-KAEEQRGQRLAADFNQYRHDAERRLAEKD 509
            .::.::|.:||.:::..|.|.||        :||. :..||...||..:..:.|....:.:..|:
Zfish  1733 AKIKKQLRDLEAKVKDQEEELDE--------QAGTIQMLEQAKLRLEMEMERLRQTHSKEIESKE 1789

  Fly   510 EEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIK 574
            :|:|.||:..|.:::|:..: :|.|...|.:|.|.|:.::.::...:   |..:..:::.:|.::
Zfish  1790 DEVEEIRQSCSKKLKQMEVQ-LEEEYEDKQKVLREKRDMEAKLMSAQ---DQVSHRDVEAEKRLR 1850

  Fly   575 KQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEA 639
            |   .|...:|...|.|..|. .|...|.::|.:|.|..:|||......:|.:|::::|::.|:.
Zfish  1851 K---DLKRTKALLADAQIMLD-HLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKSMEVEIEDL 1911

  Fly   640 ASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQE 704
            ..::::::.:..:|....|:|::|.:.:.|..||..:::....::::....:....:.|:.:.|.
Zfish  1912 HVQMDDISKSKQALEEQLSRLQREKNDLQSRMEEDQEDMNELMKKHKAAVAQSSQNLAQISDLQA 1976

  Fly   705 RIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKI 769
            ::.:....|:.::.::..|..:||..|.:.|  .|.::|:.||:||:||.:||.||.:    :|.
Zfish  1977 QLEEAMKEKQDVQEKLTALQSQLEFQEQSMV--DKSLVSRQEAKIRELETKLEFEKTQ----VKR 2035

  Fly   770 LRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELE 834
            |......:||.|.:..|:                     |.|.|..|...::...|:.|..|:::
Zfish  2036 LESLVARLKENLEKLTEE---------------------RDQRSASENREKEQNKRLLRQIRDIK 2079

  Fly   835 AAEDRADTAESSLNIIRAKH 854
              |:.|:.|:......|.||
Zfish  2080 --EEMAELAKKEAEASRKKH 2097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 182/862 (21%)
myo18abXP_021322097.1 Atrophin-1 14..>529 CDD:331285
Myosin_head 554..2053 CDD:332202 170/796 (21%)
MYSc_Myo18 629..1368 CDD:276837 7/40 (18%)
SMC_N <1939..>2169 CDD:330553 42/188 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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