DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myh10

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_009300420.1 Gene:myh10 / 555454 ZFINID:ZDB-GENE-030616-162 Length:2014 Species:Danio rerio


Alignment Length:850 Identity:220/850 - (25%)
Similarity:424/850 - (49%) Gaps:58/850 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDA 98
            |..|..|:.::..||:|||.|:..|.:.|:.|.|||.::..:...||:.......|.|...||:.
Zfish  1151 LKQLRELQAQLAELQEDLESEKAARNKAEKLKRDLSEELEALKTELEDTLDTTAAQQELRSKREQ 1215

  Fly    99 ELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQ 163
            |:.:|:|.::|.....|.....::::|...:.:..||:|...:.|...||:|...:::..||.::
Zfish  1216 EVAELKKAIDDETRNHESQIQEMRQRHGTALEEISEQLEQAKRVKGNLEKNKQTLESDNKELTNE 1280

  Fly   164 IESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQE--------------NI 214
            ::|..:.|..||....|||..:.|:..:..|..:...:::....::..|              .|
Zfish  1281 VKSLQQAKSESEHKRKKLEAQLQEVMARFSEGEKVKGELADRTHKIQTELDNVSCLLEDAEKKGI 1345

  Fly   215 ELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEE 279
            :|||||..|:              |||:|.:..|::|.|::..|.|.:.|:|.|.:::..|.|||
Zfish  1346 KLTKDVSSLE--------------SQLQDTQELLQEETRQKLNLSSRIRQLEEEKNNLLEQQEEE 1396

  Fly   280 SEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLE 344
            .|:|.:||:||....|.....:.|...:|.| .|.:||::||.|..:....:.:|...:..:.||
Zfish  1397 EESRKNLEKQLATLQAQLVETKKKLEDDVGA-LEGLEEVKRKLQKDMEVTSQKLEEKAIAFDKLE 1460

  Fly   345 KMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRL--DETIILYETSQRD----- 402
            |.|.||..|::.|::||:..    |::   |:.|||...:....|  ::||......:||     
Zfish  1461 KTKNRLQQELDDLMVDLDHQ----RQI---VSNLEKKQKKFDQMLAEEKTISARYAEERDRAEAE 1518

  Fly   403 LKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERD 467
            .:.|....:.....||:..:...:..|.||:|..::.:...:.:::.:.:||||...|.||.:.:
Zfish  1519 AREKDTKALSMARALDEALEAKEEFERLNKQLRAEMEDLISSKDDVGKNVHELEKSKRTLEQQVE 1583

  Fly   468 ELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIE 532
            |:....:|.|...:|.|....||..:....:...:|.|..:||:.|..::....::.::.|. :|
Zfish  1584 EMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFDRDLQARDEQNEEKKRALVKQVREMEAE-LE 1647

  Fly   533 AETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQAT 597
            .|.:.:......||||::.:.::|..::.|||..   .:.||    ||.:|||..:|.||:|:..
Zfish  1648 DERKQRALAVAAKKKLEMDLKDVEAQIEAANKAR---DEAIK----QLRKLQAQMKDYQRELEEA 1705

  Fly   598 -------LDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVS 655
                   ..|....:::|..|..|:.:::..|.|:.||:|..|.:.:|.|..|:...:...:|:.
Zfish  1706 RTSRDEIFTQSKENEKKLKSLEAEILQLQEDLASSERARRHAEQERDELADEISNSASGKAALLD 1770

  Fly   656 IKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEV 720
            .|.:||..::.:..:.||....:.:.::|::|..:::..:..::..|:....|.|..::.||.:.
Zfish  1771 EKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTMQVDTLNTELAGERSAAQKSENARQQLERQN 1835

  Fly   721 KNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCE 785
            |:|..:|:|:|.:..:..|..|:.|||:|..||.:||:|.:..|...||:|:.|:.:|||.:|.|
Zfish  1836 KDLKSKLQELEGSVKSKFKASIAALEAKILQLEEQLEQEAKERAAANKIVRRTEKKLKEVFMQVE 1900

  Fly   786 EDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNII 850
            :::::....::.::|:.:::...:|||.|.|..:.:.....|:.||||:.|.:.::.....:|.:
Zfish  1901 DERRHADQYKEQMEKANSRMKQLKRQLEEAEEEATRANASRRKLQRELDDATEASEGLSREVNTL 1965

  Fly   851 RAKHR 855
            :.:.|
Zfish  1966 KNRLR 1970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 219/846 (26%)
myh10XP_009300420.1 Myosin_N 37..75 CDD:280832
Myosin_head 90..812 CDD:278492
MYSc_Myh10 102..812 CDD:276952
Myosin_tail_1 889..1969 CDD:279860 219/847 (26%)
DUF342 <1085..1170 CDD:302792 7/18 (39%)
RILP-like <1528..1637 CDD:304877 25/108 (23%)
GBP_C <1641..1734 CDD:303769 26/100 (26%)
coiled coil 1705..1714 CDD:293879 0/8 (0%)
coiled coil 1723..1734 CDD:293879 3/10 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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