DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and myh10

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_009300420.1 Gene:myh10 / 555454 ZFINID:ZDB-GENE-030616-162 Length:2014 Species:Danio rerio


Alignment Length:850 Identity:220/850 - (25%)
Similarity:424/850 - (49%) Gaps:58/850 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDA 98
            |..|..|:.::..||:|||.|:..|.:.|:.|.|||.::..:...||:.......|.|...||:.
Zfish  1151 LKQLRELQAQLAELQEDLESEKAARNKAEKLKRDLSEELEALKTELEDTLDTTAAQQELRSKREQ 1215

  Fly    99 ELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQ 163
            |:.:|:|.::|.....|.....::::|...:.:..||:|...:.|...||:|...:::..||.::
Zfish  1216 EVAELKKAIDDETRNHESQIQEMRQRHGTALEEISEQLEQAKRVKGNLEKNKQTLESDNKELTNE 1280

  Fly   164 IESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQE--------------NI 214
            ::|..:.|..||....|||..:.|:..:..|..:...:::....::..|              .|
Zfish  1281 VKSLQQAKSESEHKRKKLEAQLQEVMARFSEGEKVKGELADRTHKIQTELDNVSCLLEDAEKKGI 1345

  Fly   215 ELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEE 279
            :|||||..|:              |||:|.:..|::|.|::..|.|.:.|:|.|.:::..|.|||
Zfish  1346 KLTKDVSSLE--------------SQLQDTQELLQEETRQKLNLSSRIRQLEEEKNNLLEQQEEE 1396

  Fly   280 SEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLE 344
            .|:|.:||:||....|.....:.|...:|.| .|.:||::||.|..:....:.:|...:..:.||
Zfish  1397 EESRKNLEKQLATLQAQLVETKKKLEDDVGA-LEGLEEVKRKLQKDMEVTSQKLEEKAIAFDKLE 1460

  Fly   345 KMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRL--DETIILYETSQRD----- 402
            |.|.||..|::.|::||:..    |::   |:.|||...:....|  ::||......:||     
Zfish  1461 KTKNRLQQELDDLMVDLDHQ----RQI---VSNLEKKQKKFDQMLAEEKTISARYAEERDRAEAE 1518

  Fly   403 LKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERD 467
            .:.|....:.....||:..:...:..|.||:|..::.:...:.:::.:.:||||...|.||.:.:
Zfish  1519 AREKDTKALSMARALDEALEAKEEFERLNKQLRAEMEDLISSKDDVGKNVHELEKSKRTLEQQVE 1583

  Fly   468 ELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIE 532
            |:....:|.|...:|.|....||..:....:...:|.|..:||:.|..::....::.::.|. :|
Zfish  1584 EMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFDRDLQARDEQNEEKKRALVKQVREMEAE-LE 1647

  Fly   533 AETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQAT 597
            .|.:.:......||||::.:.::|..::.|||..   .:.||    ||.:|||..:|.||:|:..
Zfish  1648 DERKQRALAVAAKKKLEMDLKDVEAQIEAANKAR---DEAIK----QLRKLQAQMKDYQRELEEA 1705

  Fly   598 -------LDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVS 655
                   ..|....:::|..|..|:.:::..|.|:.||:|..|.:.:|.|..|:...:...:|:.
Zfish  1706 RTSRDEIFTQSKENEKKLKSLEAEILQLQEDLASSERARRHAEQERDELADEISNSASGKAALLD 1770

  Fly   656 IKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEV 720
            .|.:||..::.:..:.||....:.:.::|::|..:::..:..::..|:....|.|..::.||.:.
Zfish  1771 EKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTMQVDTLNTELAGERSAAQKSENARQQLERQN 1835

  Fly   721 KNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCE 785
            |:|..:|:|:|.:..:..|..|:.|||:|..||.:||:|.:..|...||:|:.|:.:|||.:|.|
Zfish  1836 KDLKSKLQELEGSVKSKFKASIAALEAKILQLEEQLEQEAKERAAANKIVRRTEKKLKEVFMQVE 1900

  Fly   786 EDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNII 850
            :::::....::.::|:.:::...:|||.|.|..:.:.....|:.||||:.|.:.::.....:|.:
Zfish  1901 DERRHADQYKEQMEKANSRMKQLKRQLEEAEEEATRANASRRKLQRELDDATEASEGLSREVNTL 1965

  Fly   851 RAKHR 855
            :.:.|
Zfish  1966 KNRLR 1970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 219/846 (26%)
myh10XP_009300420.1 Myosin_N 34..79 CDD:460670
MYSc_Myh10 102..812 CDD:276952
Myosin_tail_1 889..1969 CDD:460256 219/847 (26%)
Blue background indicates that the domain is not in the aligned region.

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