DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and myh11a

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_021332550.2 Gene:myh11a / 554168 ZFINID:ZDB-GENE-050531-1 Length:1983 Species:Danio rerio


Alignment Length:861 Identity:225/861 - (26%)
Similarity:413/861 - (47%) Gaps:66/861 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDA 98
            |..:..||..|..||:|||.||..|.:.|:.|.||..::..:...||:.......|.|...||:.
Zfish  1117 LKKIRELEGHISDLQEDLESERAARNKAEKTKRDLGEELEALKSELEDTLDTTATQQELRAKREQ 1181

  Fly    99 ELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQ 163
            |:..|::.:||.....|.....:::||.:.:.:..||:|...:.|...||.|...:.|..||..:
Zfish  1182 EVTLLKRAIEDESRVHEAQVQEMRQKHTQTLEELTEQLEQSKRVKVNLEKAKQALEKETSELHVE 1246

  Fly   164 IESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQE--------------NI 214
            :.|..:.|...|....|||..:::|..:..:..|...::....|:::.|              ||
Zfish  1247 LRSLTQGKQDVEHKKKKLEGQLADLQSRFNDSERHKAELGDRVSKITVELESVTNLLNEAEGKNI 1311

  Fly   215 ELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEE 279
            :|:|||..|.              ||::|.:..|.:|.|::..|.:.|.|:|.:.::::.||:||
Zfish  1312 KLSKDVASLS--------------SQVQDTQELLAEETRQKLQLSTKLRQIEDDRNALQEQLDEE 1362

  Fly   280 SEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLE 344
            :||:.::||.:...|...:.::.|. .|:....|.:||.:::.|..:.......|......:.||
Zfish  1363 AEAKRNVERHVSTLNIQLSDFKKKL-EEMTGNVELLEEGKKRLQRDLEAANTQFEEKAAAYDKLE 1426

  Fly   345 KMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHAD 409
            |.|.||..|:|..::||:..    |:|   |:.|||...:....|.|        ::.:.:|:||
Zfish  1427 KTKNRLQQELEDTLMDLDNQ----RQL---VSNLEKKQKKFDQMLAE--------EKSISSKYAD 1476

  Fly   410 ------------------LVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELE 456
                              |.|.:.|..:.::   :..|.||.|..::.:...:.:::.:.:||||
Zfish  1477 ERDRAEAEAREKETKALSLARALEEAQEARE---EFERANKALRAEMEDLVSSKDDVGKNVHELE 1538

  Fly   457 LELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSI 521
            ...|.||.:.:|:....:|.|...:|.|....||..:....:...||.|..:||:.|..::|...
Zfish  1539 KSKRGLEAQVEEMKTQLEELEDELQAAEDAKLRLEVNMQALKAQFERDLQGRDEQGEEKKRQLVK 1603

  Fly   522 EIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAH 586
            ::.:|... :|.|.:.:|.:...||||:..:.:||..::.:||...:..|.::|...|:.:.|..
Zfish  1604 QVRELETE-LEDERKQRTALAASKKKLEGDLKDLEGQIETSNKGRDEAIKQLRKLQAQMKDFQRE 1667

  Fly   587 YEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANV 651
            .:|.....:..|......:|:...|..||.:::..|.:|.|||:.||.:.:|.|..:....:...
Zfish  1668 LDDAHAAREEVLSSAKENERKAKTLEAELLQLQEDLAAAERAKKQVEAERDELADELASNASGKS 1732

  Fly   652 SLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSL 716
            :|...|.:||.::..:..:.||....:.:.::|.:|...::..:..::..|:....|.|:.::.:
Zfish  1733 ALSDEKRRLEAKIQQLEEELEEEQGNMEMLNDRLRKSAQQVDQLTNELQAERTTSQKNESARQLM 1797

  Fly   717 EVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVL 781
            |.:.|.|..:|:|:|....:..|..||.|||::..||.:||:|.|....|.|.:|:|::.:||::
Zfish  1798 ERQNKELKAKLQEMENQVKSKFKSSISALEAKVAQLEEQLEQESRDKQNTAKAVRQKDKKLKEMM 1862

  Fly   782 VQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESS 846
            .|.|:::|.....:|..||:||::...:|||.|.|..||:.|...|:.||||:.|.:..|.....
Zfish  1863 TQVEDERKQAEQYKDQADKATARVKQLKRQLEESEEESQRITAARRKLQRELDEATETNDAMSRE 1927

  Fly   847 LNIIRAKHRTFVTTST 862
            :|.:::|.|....||:
Zfish  1928 VNSLKSKLRRGNETSS 1943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 221/850 (26%)
myh11aXP_021332550.2 None

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