DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and MYO1B

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_047300366.1 Gene:MYO1B / 4430 HGNCID:7596 Length:1156 Species:Homo sapiens


Alignment Length:685 Identity:130/685 - (18%)
Similarity:244/685 - (35%) Gaps:215/685 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 LEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWN 305
            ::....||....||.|.|| ::.::|::...:.|.:.......::                 ..|
Human     1 MQSKEERLTSWGRRGSELE-TMAKMEVKTSLLDNMIGVGDMVLLE-----------------PLN 47

  Fly   306 SEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRE 370
            .|..     :..:::::.  .:|:..:|.|:::.||....:......:||      |..|.:..|
Human    48 EETF-----INNLKKRFD--HSEIYTYIGSVVISVNPYRSLPIYSPEKVE------EYRNRNFYE 99

  Fly   371 LTKSVNTL-EKHNVELKSRLDETIILYETSQRDLKNKHADLVRTV--------HELDKVKDNNNQ 426
            |:..:..| ::....|:.:..:..||........|.:.:.||.:.        .|:::||:   |
Human   100 LSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKE---Q 161

  Fly   427 LTRENKKLGDDLHEAKGAINELNRRLHE-LELELRRLENERDELTAAYKE--AEAGRKAEEQRGQ 488
            |.:.|..| :....||...|:.:.|..: :::|   .:.:.|.|......  .|..|..::.||:
Human   162 LLQSNPVL-EAFGNAKTVRNDNSSRFGKYMDIE---FDFKGDPLGGVISNYLLEKSRVVKQPRGE 222

  Fly   489 R---------------------LAADFNQYR--------------------------------HD 500
            |                     |..||::|.                                |:
Human   223 RNFHVFYQLLSGASEELLNKLKLERDFSRYNYLSLDSAKVNGVDDAANFRTVRNAMQIVGFMDHE 287

  Fly   501 AERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLK-TEVTRIKKKLQIQITELEMSLDVANK 564
            ||..||    .:.|:.|..:||        .:.|:|:. .:.::||.|.:::        ::...
Human   288 AESVLA----VVAAVLKLGNIE--------FKPESRVNGLDESKIKDKNELK--------EICEL 332

  Fly   565 TNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAK 629
            |.|| |.|::: :.....::|..|.|...|......||                |..|     ||
Human   333 TGID-QSVLER-AFSFRTVEAKQEKVSTTLNVAQAYYA----------------RDAL-----AK 374

  Fly   630 RTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASD-YEEVSKE---LRISDERYQKVQV 690
            ......:....:||||...|.   ..::.|:...|.:...: :|:.|.|   :...:|:.|::.:
Human   375 NLYSRLFSWLVNRINESIKAQ---TKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFI 436

  Fly   691 ELKHVVEQVHEEQERIVKLETIKKSLE---VEVKNLSIRLEEVELN---------------AVAG 737
            ||     .:.||||     |.|::.:|   ::..|.:|..:.:|.|               ....
Human   437 EL-----TLKEEQE-----EYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVT 491

  Fly   738 SKRIISKL----------EARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCE--EDQKN 790
            .:..:.||          |:|:......|.:....|: ..:|    :....:||.|.|  .|:.|
Human   492 DETFLEKLNQVCATHQHFESRMSKCSRFLNDTSLPHS-CFRI----QHYAGKVLYQVEGFVDKNN 551

  Fly   791 LILLQD----------ALDKS------TAKINIYR 809
            .:|.:|          ||.||      .||||:.|
Human   552 DLLYRDLSQAMWKASHALIKSLFPEGNPAKINLKR 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 130/685 (19%)
MYO1BXP_047300366.1 MYSc_Myo1 49..708 CDD:276829 120/619 (19%)
IQ 769..791 CDD:197470
Myosin_TH1 961..1138 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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