DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and Myo18a

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_036012684.1 Gene:Myo18a / 360013 MGIID:2667185 Length:2493 Species:Mus musculus


Alignment Length:871 Identity:187/871 - (21%)
Similarity:392/871 - (45%) Gaps:153/871 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQM------SERLEEA--EGGAEH--QFE 91
            |::...:..::.|:.....||.:.::.||:...:.:.::      ..||||.  |..:.|  .|:
Mouse  1183 LTKKHGRNYIVVDEKRAVEELLESLDLEKSSCCLGLSRVFFRAGTLARLEEQRDEQTSRHLTLFQ 1247

  Fly    92 AN----------RKRDAELLKLRKLLEDVHLESEETTLLLKKKHN--------EIITDFQEQVEI 138
            |.          :||..:.|.:|.:.:::            ||:.        ::.|..:..:::
Mouse  1248 AACRGYLARQHFKKRKIQDLAIRCVQKNI------------KKNKGVKDWPWWKLFTTVRPLIQV 1300

  Fly   139 LTKNKARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHIS--KLEVSISELNVKIEELNRTVID 201
            ....:....||:     |:.:|.|::|...||:  :|..:|  :||..||||..::.:...|...
Mouse  1301 QLSEEQIRNKDE-----EIQQLRSKLEKVEKER--NELRLSSDRLETRISELTSELTDERNTGES 1358

  Fly   202 ISSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRL----------EDED---R 253
            .|......:.|.:...|::::|:.|.|  :..|...:.::|....||          :|:|   .
Mouse  1359 ASQLLDAETAERLRTEKEMKELQTQYD--ALKKQMEVMEMEVMEARLIRAAEINGEVDDDDAGGE 1421

  Fly   254 RRSLLESSLHQVEIELDSVRNQLEE----ESEARIDLERQLVKANADATSWQNKWNSEVAARAEE 314
            .|...|.::.:|:.....::.:||:    |.::|..|||:|....||         |:.:.||  
Mouse  1422 WRLKYERAVREVDFTKKRLQQELEDKMEVEQQSRRQLERRLGDLQAD---------SDESQRA-- 1475

  Fly   315 VEEIRRKYQVRITELEE---HIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVN 376
            ::::::|.|....||::   |:|...|:.:.|||.:.|..||:.....:.::......:|.:..:
Mouse  1476 LQQLKKKCQRLTAELQDTKLHLEGQQVRNHELEKKQRRFDSELSQAHEETQREKLQREKLQREKD 1540

  Fly   377 TLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELD-KVKDNNNQLTRENKKLGDDLHE 440
            .|......||.:::|         :||  ..|...:.|..|: :::|.::|.:::...|.     
Mouse  1541 MLLAEAFSLKQQMEE---------KDL--DIAGFTQKVVSLEAELQDISSQESKDEASLA----- 1589

  Fly   441 AKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGR-KAEEQRGQRLAADFNQYRHDAERR 504
                  ::.::|.:||.:::..|.|.||        :||. :..||...||..:..:.|....:.
Mouse  1590 ------KVKKQLRDLEAKVKDQEEELDE--------QAGSIQMLEQAKLRLEMEMERMRQTHSKE 1640

  Fly   505 LAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDL 569
            :..:|||:|..|:....:::|:..: :|.|...|.:..|.|::|:.:::.|.   |..|:.:.:.
Mouse  1641 MESRDEEVEEARQSCQKKLKQMEVQ-LEEEYEDKQKALREKRELESKLSTLS---DQVNQRDFES 1701

  Fly   570 QKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVEL 634
            :|.::|   .|...:|...|.|..|. .|...|.::|.:|.|..:|||......:|.:|::.:|:
Mouse  1702 EKRLRK---DLKRTKALLADAQIMLD-HLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEV 1762

  Fly   635 QYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQV 699
            :.|:...:|:::..|..:|....|:|::|.:.:.:..||..:::....::::....:....:.|:
Mouse  1763 EMEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDMAQM 1827

  Fly   700 HEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHA 764
            ::.|.:|.:....|:.|:.:::.|..::|.:|.:.|  .|.::|:.||:||:||..||.||.:  
Mouse  1828 NDLQAQIEESNKEKQELQEKLQALQSQVEFLEQSMV--DKSLVSRQEAKIRELETRLEFEKTQ-- 1888

  Fly   765 ETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRF 829
              :|.|......:||.:.:..|::          |:..|..|..:.|              .:|.
Mouse  1889 --VKRLENLASRLKETMEKLTEER----------DQRAAAENREKEQ--------------NKRL 1927

  Fly   830 QREL-EAAEDRADTAESSLNIIRAKH 854
            ||:| :..|:.::.|.......|.||
Mouse  1928 QRQLRDTKEEMSELARKEAEASRKKH 1953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 185/868 (21%)
Myo18aXP_036012684.1 PDZ_MYO18-like 220..308 CDD:467229
COG5022 429..1950 CDD:227355 184/866 (21%)
MYSc_Myo18 467..1224 CDD:276837 6/40 (15%)
PRK03918 1875..>2040 CDD:235175 26/107 (24%)
Blue background indicates that the domain is not in the aligned region.

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