DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myhc4

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001018321.1 Gene:myhc4 / 334274 ZFINID:ZDB-GENE-030131-6206 Length:1935 Species:Danio rerio


Alignment Length:833 Identity:290/833 - (34%)
Similarity:493/833 - (59%) Gaps:9/833 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSL-SRLEDKIRLLQ-------DDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAE 87
            |:|..|| ::|:.||:.||       :::|.||..|.::|:::||||.::.::|||||||.|...
Zfish  1096 IEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEISERLEEAGGATA 1160

  Fly    88 HQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAK 152
            .|.|.|:||:||..|||:.||:..|:.|.|...|:||..:.:.:..||::.|.:.|.:.||:|::
Zfish  1161 AQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSE 1225

  Fly   153 FQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELT 217
            ::.|:.:|.|.:|:..|.|...||....:|..:||:..|.:|..|.:.|:|:.|:||..||.|..
Zfish  1226 YKMEIDDLSSNMEAVAKAKANLEKMCRTVEDQLSEIKSKNDENLRQINDLSAQRARLQTENGEFG 1290

  Fly   218 KDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEA 282
            :.:::.:..:..::..|.....|:|:.:|::|:|.:.::.|..::.....:.|.:|.|.|||.||
Zfish  1291 RQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEA 1355

  Fly   283 RIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMK 347
            :.:|:|.:.|||::...|:.|:.::...|.||:||.::|...|:.|.||.||::..|..:|||.|
Zfish  1356 KAELQRGMSKANSEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTK 1420

  Fly   348 TRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVR 412
            .||..|||.|:||:|::|.....|.|.....:|...|.|.:.:|.....|.:|::.::...:|.:
Zfish  1421 QRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAELEGAQKEARSLSTELFK 1485

  Fly   413 TVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAE 477
            ..:..::..|....|.||||.|..::.:....|.|..:.:||||...:.:|.|:.|:..|.:|||
Zfish  1486 MKNSYEETLDQLETLKRENKNLQQEISDLTEQIGETGKSIHELEKAKKTVETEKAEIQTALEEAE 1550

  Fly   478 AGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVT 542
            ...:.||.:..|:..:.||.:.:.:|:|||||||||.| |:.|..:.:.....:::|.|.:.:..
Zfish  1551 GTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEIEQI-KRNSQRVTEAMQSTLDSEVRSRNDAL 1614

  Fly   543 RIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRR 607
            |||||::..:.|:|:.|..||:...:.||.::....||.:.|.|.:|..|..:...:|.|:.:||
Zfish  1615 RIKKKMEGDLNEMEIQLSHANRQAAEAQKQLRNVQAQLKDAQLHLDDAVRGQEDMKEQVAMVERR 1679

  Fly   608 LAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYE 672
            ...:..|:||:|:.|:...|.::..|.:..:|:.|:..|.:.|.||::.|.|||.:|..:..:.|
Zfish  1680 NTLMQSEIEELRAALEQTERGRKVAEQELVDASERVGLLHSQNTSLLNTKKKLESDLVQIQGEVE 1744

  Fly   673 EVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAG 737
            :..:|.|.::|:.:|...:...:.|::.:||:....||.:||:||:.||:|..||:|.|..|:.|
Zfish  1745 DTVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEITVKDLQHRLDEAENLAMKG 1809

  Fly   738 SKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKST 802
            .|:.:.|||:|:|:||.|:|.|:||.|:.:|.:||.||.|||:..|.|||:||:..|||.:||..
Zfish  1810 GKKQLQKLESRVRELESEVEAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNINRLQDLVDKLQ 1874

  Fly   803 AKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            .|:..|:||..|.|..:....:::|:.|.|||.||:|||.:||.:|.:|||.|
Zfish  1875 LKVKAYKRQSEEAEEQANSHLSKLRKVQHELEEAEERADISESQVNKLRAKSR 1927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 285/826 (35%)
myhc4NP_001018321.1 Myosin_N 36..74 CDD:280832
Myosin_head 89..768 CDD:278492
MYSc_class_II 101..768 CDD:276951
Myosin_tail_1 848..1925 CDD:279860 287/829 (35%)
SPEC 881..1043 CDD:295325
RILP-like <1002..1096 CDD:304877 290/833 (35%)
MIT_CorA-like <1297..>1409 CDD:294313 34/111 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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