DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myh9a

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001091647.2 Gene:myh9a / 333938 ZFINID:ZDB-GENE-030131-5870 Length:1961 Species:Danio rerio


Alignment Length:825 Identity:221/825 - (26%)
Similarity:425/825 - (51%) Gaps:12/825 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDAEL 100
            |:..:|.:|..||:|||:|:..|.:.|:::.||..::..:...||:.......|.|...||:.|:
Zfish  1109 SIREMEAQISELQEDLELEKAARNKAEKQRRDLGEELEALKTELEDTLDSTAAQQELRAKRETEV 1173

  Fly   101 LKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIE 165
            .:|:|.|||.....|:....:::|||:...:..||:|...::||..:|.|...::|..||..:::
Zfish  1174 TQLKKTLEDEARAHEQMLSEVRQKHNQAFEELNEQLEQSKRSKASVDKAKQALESERNELQIELK 1238

  Fly   166 SYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTV 230
            |.::.|..||....|.|..:.||.||..|..|...::....|::..|...|...|  .||:..::
Zfish  1239 SLSQSKNDSENRRKKAESQLQELQVKHTESERQKHELLDKVSKMQAELESLQGTV--TKVESKSI 1301

  Fly   231 SFSK--SQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKA 293
            ..:|  |.|.|||:||:..||:|.|::..:.:.|.|:|.|.::::..||||.|::.::|:||..|
Zfish  1302 KAAKDCSAVESQLKDAQALLEEETRQKLAISTRLRQLEDEQNNLKEMLEEEEESKKNVEKQLHTA 1366

  Fly   294 NADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVLI 358
            .|.....:.|...| |...|.:|:.::|.|..:..:.:.:|......:.|:|.||||..|::.::
Zfish  1367 QAQLAEMKKKIEQE-AQSLESMEDGKKKLQREVESVLQQLEERNASYDKLDKTKTRLQRELDDVL 1430

  Fly   359 IDLEKSNNSCRELTKSVNTLEKHNVELKS---RLDETIILYETSQRDLKNKHADLVRTVHELDKV 420
            :|......:.:||.:.....::...|.||   :..|.....|...|:.:.|...|.|   ||:.:
Zfish  1431 VDQGHLRQTVQELERKQKKFDQMLAEEKSISTKYAEERDRAEAEAREKETKSLTLAR---ELEAM 1492

  Fly   421 KDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQ 485
            .|..|:|.|.||:|..::.:...:.::..:.:||||...|.:|.:.:|:....:|.|...:..|.
Zfish  1493 TDLKNELERVNKQLKTEMEDLVSSKDDAGKSVHELERAKRGMEQQLEEMKTQLEELEDELQLTED 1557

  Fly   486 RGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQI 550
            ...||..:....:...||.|..:||:.|..|||...::.::... :|.|.:.:.:...::|||::
Zfish  1558 AKLRLEVNMQALKAQFERDLQSRDEQGEEKRKQLVKQVREMEME-LEDERKQRAQAVSVRKKLEL 1621

  Fly   551 QITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGEL 615
            .::||...:|:|||...:..|.:||...|:.|....:||::.....:|:|....:|::..:..|:
Zfish  1622 DLSELAAQIDLANKARDEALKQLKKLQAQMKEQMREFEDLRLSRDESLNQAKENERKIKSMEAEI 1686

  Fly   616 EEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRI 680
            .::...|.:|:||||.::.:.:|....||.....|......:.:||..::.:..:.||....:.:
Zfish  1687 MQLHEDLAAADRAKRQIQQERDELQDEINSQNAKNSLSSDERRRLEARIAQLEEELEEEHLSVEL 1751

  Fly   681 SDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKL 745
            .::|.:|..::.:.|..::..|:....:||.::..|:.:.|::..:|:|:|....:..|..|:.|
Zfish  1752 VNDRLKKASLQAEQVTVELTAERSNSQRLEGLRSQLDRQNKDMKQKLQELEGAVKSKYKSTITAL 1816

  Fly   746 EARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRR 810
            |.:|:.||.:|:.|.:...::.|.:|:.|:.:||||:|.|::::|....:...:|:..::...:|
Zfish  1817 ETKIQQLEEQLDSEMKERQQSTKQVRRVEKKLKEVLLQVEDERRNADQSKTETEKANIRLKQMKR 1881

  Fly   811 QLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            ||.|.|..:.:.....|:.:||||.|.:.|......::.::.|.|
Zfish  1882 QLEETEEEAARANASCRKLRRELEDATESASAMNREVSTLKNKLR 1926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 219/821 (27%)
myh9aNP_001091647.2 Myosin_N 28..66 CDD:280832
Myosin_head 81..768 CDD:278492
MYSc_Myh18 93..768 CDD:276895
Myosin_tail_1 845..1925 CDD:279860 219/822 (27%)
crotonase-like 1067..>1101 CDD:304874
DUF2570 1777..1878 CDD:305162 27/100 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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