DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Ccdc158

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_006535051.1 Gene:Ccdc158 / 320696 MGIID:2444555 Length:1125 Species:Mus musculus


Alignment Length:965 Identity:201/965 - (20%)
Similarity:381/965 - (39%) Gaps:248/965 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYSYRATSTGPGTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQM 75
            ||.....|....|.....|:|:.:  |.....:::.||..|....||.   |::|..|...||.:
Mouse    55 KYEVELDSPRKSTPYPGKEHIERV--LEEYSHQVKDLQRRLNESNELH---EKQKFYLRQSVIDL 114

  Fly    76 SERLEEAEGGAEHQFEANRK----------------RDAELLKLRK--LLEDVHLESEETTLLL- 121
            ..:|:|.:...:...:..|:                |:.|..|..|  :|:|...:.|:...:: 
Mouse   115 QTKLQEMQMERDAMADIRRRESQSQEESRNQLQNTVRELEAAKCLKEDMLKDSSTQIEQLRKMML 179

  Fly   122 -----KKKHNEIITDFQEQVEILTKNKARAEKDK-----------------AKFQTEVYELLSQI 164
                 .::...|:.||:|     ...|...|.|.                 .:..||:..|..:|
Mouse   180 SHEGVLQEIRSILVDFEE-----ASGKKICEHDSMSTMHFRSLGSAISKILRELDTEISFLKGRI 239

  Fly   165 ------------ESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLS--QENIE 215
                        ||.||.:::.::|..::|..|||..|:|..|....   ||.||:.:  |..:|
Mouse   240 FPVEDQLETLKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKA---SSARSQANSVQSQLE 301

  Fly   216 LTKDVQD--------LKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSV 272
            :   :|:        ...||..:..:.||:.|:|.:::|..||:...   ||..|.....||...
Mouse   302 I---IQEQARNQNSMYMRQLSDLESTVSQLRSELRESKRMYEDKIEE---LEKQLVLANSELTEA 360

  Fly   273 RNQLEEESEARIDLERQLVKANAD---------ATSWQNK--WNSEVAARAEEVEEIRRKYQVRI 326
            |.:.::.|:...:|:.||.|..||         ....|||  |:.: ...:..::.:||:...|.
Mouse   361 RTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRD-TGNSITIDHLRRELDDRN 424

  Fly   327 TELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDE 391
            .|: :.:|:|      |:.||:....::|..:..::..|.|..:::.....||.....|:..::|
Mouse   425 MEV-QRLEAL------LKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEE 482

  Fly   392 TI---ILYETSQRDLKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLH 453
            ..   :..|:|:|.:    :||..::.|.::..:..|                 ..|.:|..|: 
Mouse   483 LTAKKMNLESSERTV----SDLTASLQEKERAIEATN-----------------AEITKLRSRV- 525

  Fly   454 ELEL-ELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRK 517
            :|:| ||:.|:||.|.|.....|.||                      .:.::||||:.||.:|:
Mouse   526 DLKLQELQHLKNEGDHLRNVQTECEA----------------------LKLQMAEKDKVIEILRQ 568

  Fly   518 QTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQ--KVIK-KQSLQ 579
            |            ||..|:|..:..|....:|::..:||..:   |...::||  |::| |:..:
Mouse   569 Q------------IENMTQLVGQHGRTAGAMQVEKAQLEKEI---NDRKLELQEFKILKDKKDAK 618

  Fly   580 LTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRIN 644
            :.||:|...|:                       |||:|:.....:.|.:...::::|. ...:|
Mouse   619 IRELEARVSDL-----------------------ELEKVKLVNAGSERLRAVKDIRHER-DQLLN 659

  Fly   645 ELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQ----KVQVELKHVVEQVHEEQER 705
            |:.|:..           ||:.::.|||.:.:..|...|..:    :::::||....::.:.:..
Mouse   660 EVKTSRT-----------ELNHLSEDYEVLKRNFRNKSEEMESTTNRLKMQLKSAQSELEQTRNT 713

  Fly   706 IVKLE-----------------TIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLE 753
            :..:|                 |.|:. :::.....::..|..:.:....:..:.:.::::....
Mouse   714 LKTMEGSDGHAMKVAMGMQKQITAKRG-QIDALQSKVQFLEEAVTSANKERHFLKEEKSKLSQEL 777

  Fly   754 LELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKI----NIYRRQLSE 814
            ..:..||.:.|..:::||.:||.:||.:...|.          ||||::.:.    :|.:||..|
Mouse   778 STVATEKNKMAGELEVLRSQERRLKEKVANMEV----------ALDKASLQFAECQDIIQRQEQE 832

  Fly   815 QEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHRTFVTT--STVPGSQ 867
            ...:..|.|..|:..|       ....|:.||:. .|......||.  |.:|.||
Mouse   833 SVRLKLQHTLDVKELQ-------GPGYTSNSSVK-PRLLQPASVTRSHSNIPSSQ 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 189/924 (20%)
Ccdc158XP_006535051.1 CCDC158 1..1054 CDD:318193 201/965 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6815
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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