DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and Myh14

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001094160.1 Gene:Myh14 / 308572 RGDID:1306821 Length:2000 Species:Rattus norvegicus


Alignment Length:875 Identity:220/875 - (25%)
Similarity:406/875 - (46%) Gaps:48/875 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RATSTGPGTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERL 79
            ||...|...|       |.|.||...:..:...|:|||.||..|.:.|:::.||..::..:...|
  Rat  1119 RAEEEGGARA-------QLLKSLREAQAGLAEAQEDLEAERVARAKAEKQRRDLGEELEALRGEL 1176

  Fly    80 EEAEGGAEHQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKA 144
            |:.......|.|...||:.|:.:|:|.||:.....|.....|:::|::.:.:..||:|...:.|:
  Rat  1177 EDTLDSTNAQQELRSKREQEVTELKKTLEEEARTHEVAMQELRQRHSQALVELTEQLEQARRGKS 1241

  Fly   145 RAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVK-----------IEELNRT 198
            ..||.:...:.||.||.:::.|....:...|:...:||..:.|:..:           .|:|.|.
  Rat  1242 VWEKTRLSLEAEVSELKTELSSLQTSRQEGEQKRRRLESQLQEVQGRSSDSERARAEAAEKLQRA 1306

  Fly   199 VIDISSHRSRLSQ---ENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLES 260
            .:::.|..:.||:   :.|.|:|::              |...|||.|.:..|::|.|.:..|.|
  Rat  1307 QVELESVSTALSEAESKAIRLSKEL--------------SSAESQLHDTQELLQEETRAKLALGS 1357

  Fly   261 SLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVR 325
            .:..:|.|...:|.|:|||..||....|:|....|..:.|:.: ..|.||..|..||.||:....
  Rat  1358 RVRALEAEAAGLREQMEEEVVARERAGRELQTTQAQLSEWRRR-QEEEAAVLEAGEEARRRAARE 1421

  Fly   326 ITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLD 390
            ...|.:.:......|..||:.:.||..|::...:||.:.......|.|.....::...|.|:.:.
  Rat  1422 AETLAQRLAEKTEAVERLERARRRLQQELDDATVDLGQQKQLLSTLEKKQRKFDQLLAEEKAAVL 1486

  Fly   391 ETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHEL 455
            ..:...|..:.:.:.:.|..:.....|::.::...:|.|:|:.|..:|.....:.:::.:.:|||
  Rat  1487 RAVEDRERVEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKNVHEL 1551

  Fly   456 ELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTS 520
            |...|..|....:|.....|.|....|.|....||.......:...||.|..:|:..|..|:|.:
  Rat  1552 ERARRVAEQAASDLRTQVTELEDELTAAEDAKLRLEVTVQALKAQHERDLQGRDDAGEERRRQLA 1616

  Fly   521 IEIEQLNARVIEAETRLKTEVTRI--KKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTEL 583
               :||....:|.:...|.....:  :|||::::.||:.....|.:...:..|.:||...|:.||
  Rat  1617 ---KQLRDAEVERDEERKQRALAMAARKKLELELEELKAQTSAAGQGKEEAVKQLKKMQAQMKEL 1678

  Fly   584 QAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTT 648
            ....|:.:...:........:::||.||..|:..::..|.:::||:|..:...:|.|..:.....
  Rat  1679 WREVEETRSSREEMFTLSRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMAEEVASGNL 1743

  Fly   649 ANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIK 713
            :..:.:..|.:||..|..:..:.||......:..:.|:|:.::::.:..::..|:....|.|:.:
  Rat  1744 SKAATLEEKRQLEGRLGQLEEELEEEQNNSELLKDHYRKLVLQVETLTTELSAERSFSAKAESGR 1808

  Fly   714 KSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVK 778
            :.||.:::.|..||.|.:..|.|..|.:|:.||:::...|.:||:|.|....:.|::|:.|:.:|
  Rat  1809 QQLERQIQELRARLGEEDAGARARQKMLIAALESKLAQAEEQLEQESRERILSGKLVRRAEKRLK 1873

  Fly   779 EVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTA 843
            ||::|.:|:::....|:|.|:||..::...:|||.|.|..:.:.....||.|||||...:.|::.
  Rat  1874 EVVLQVDEERRVADQLRDQLEKSNLRLKQLKRQLEEAEEEASRAQAGRRRLQRELEDVTESAESM 1938

  Fly   844 ESSLNIIRAKHR----TFVTTSTVPGSQVY 869
            ...:..:|.:.|    || ||.||  .||:
  Rat  1939 NREVTTLRNRLRRGPLTF-TTRTV--RQVF 1965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 206/834 (25%)
Myh14NP_001094160.1 MYSc_Myh14_mammals 115..792 CDD:276893
Myosin_tail_1 869..1949 CDD:460256 211/854 (25%)
Blue background indicates that the domain is not in the aligned region.

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