DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Myh14

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_038967907.1 Gene:Myh14 / 308572 RGDID:1306821 Length:2041 Species:Rattus norvegicus


Alignment Length:875 Identity:220/875 - (25%)
Similarity:406/875 - (46%) Gaps:48/875 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RATSTGPGTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERL 79
            ||...|...|       |.|.||...:..:...|:|||.||..|.:.|:::.||..::..:...|
  Rat  1160 RAEEEGGARA-------QLLKSLREAQAGLAEAQEDLEAERVARAKAEKQRRDLGEELEALRGEL 1217

  Fly    80 EEAEGGAEHQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKA 144
            |:.......|.|...||:.|:.:|:|.||:.....|.....|:::|::.:.:..||:|...:.|:
  Rat  1218 EDTLDSTNAQQELRSKREQEVTELKKTLEEEARTHEVAMQELRQRHSQALVELTEQLEQARRGKS 1282

  Fly   145 RAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVK-----------IEELNRT 198
            ..||.:...:.||.||.:::.|....:...|:...:||..:.|:..:           .|:|.|.
  Rat  1283 VWEKTRLSLEAEVSELKTELSSLQTSRQEGEQKRRRLESQLQEVQGRSSDSERARAEAAEKLQRA 1347

  Fly   199 VIDISSHRSRLSQ---ENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLES 260
            .:::.|..:.||:   :.|.|:|::              |...|||.|.:..|::|.|.:..|.|
  Rat  1348 QVELESVSTALSEAESKAIRLSKEL--------------SSAESQLHDTQELLQEETRAKLALGS 1398

  Fly   261 SLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVR 325
            .:..:|.|...:|.|:|||..||....|:|....|..:.|:.: ..|.||..|..||.||:....
  Rat  1399 RVRALEAEAAGLREQMEEEVVARERAGRELQTTQAQLSEWRRR-QEEEAAVLEAGEEARRRAARE 1462

  Fly   326 ITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLD 390
            ...|.:.:......|..||:.:.||..|::...:||.:.......|.|.....::...|.|:.:.
  Rat  1463 AETLAQRLAEKTEAVERLERARRRLQQELDDATVDLGQQKQLLSTLEKKQRKFDQLLAEEKAAVL 1527

  Fly   391 ETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHEL 455
            ..:...|..:.:.:.:.|..:.....|::.::...:|.|:|:.|..:|.....:.:::.:.:|||
  Rat  1528 RAVEDRERVEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKNVHEL 1592

  Fly   456 ELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTS 520
            |...|..|....:|.....|.|....|.|....||.......:...||.|..:|:..|..|:|.:
  Rat  1593 ERARRVAEQAASDLRTQVTELEDELTAAEDAKLRLEVTVQALKAQHERDLQGRDDAGEERRRQLA 1657

  Fly   521 IEIEQLNARVIEAETRLKTEVTRI--KKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTEL 583
               :||....:|.:...|.....:  :|||::::.||:.....|.:...:..|.:||...|:.||
  Rat  1658 ---KQLRDAEVERDEERKQRALAMAARKKLELELEELKAQTSAAGQGKEEAVKQLKKMQAQMKEL 1719

  Fly   584 QAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTT 648
            ....|:.:...:........:::||.||..|:..::..|.:::||:|..:...:|.|..:.....
  Rat  1720 WREVEETRSSREEMFTLSRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMAEEVASGNL 1784

  Fly   649 ANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIK 713
            :..:.:..|.:||..|..:..:.||......:..:.|:|:.::::.:..::..|:....|.|:.:
  Rat  1785 SKAATLEEKRQLEGRLGQLEEELEEEQNNSELLKDHYRKLVLQVETLTTELSAERSFSAKAESGR 1849

  Fly   714 KSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVK 778
            :.||.:::.|..||.|.:..|.|..|.:|:.||:::...|.:||:|.|....:.|::|:.|:.:|
  Rat  1850 QQLERQIQELRARLGEEDAGARARQKMLIAALESKLAQAEEQLEQESRERILSGKLVRRAEKRLK 1914

  Fly   779 EVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTA 843
            ||::|.:|:::....|:|.|:||..::...:|||.|.|..:.:.....||.|||||...:.|::.
  Rat  1915 EVVLQVDEERRVADQLRDQLEKSNLRLKQLKRQLEEAEEEASRAQAGRRRLQRELEDVTESAESM 1979

  Fly   844 ESSLNIIRAKHR----TFVTTSTVPGSQVY 869
            ...:..:|.:.|    || ||.||  .||:
  Rat  1980 NREVTTLRNRLRRGPLTF-TTRTV--RQVF 2006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 206/834 (25%)
Myh14XP_038967907.1 Motor_domain 115..833 CDD:419868
Myosin_tail_1 910..1990 CDD:396244 211/854 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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