DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and myh7

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001106204.1 Gene:myh7 / 30616 ZFINID:ZDB-GENE-991123-5 Length:1938 Species:Danio rerio


Alignment Length:832 Identity:293/832 - (35%)
Similarity:494/832 - (59%) Gaps:15/832 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRK 95
            ||....|..|:.:|..|:::||.||..|.::|:::|||:.::.::|||||||.|....|.|.|:|
Zfish  1104 IQLQKKLKELQARIEELEEELEAERAARAKVEKQRADLARELEEISERLEEAGGATAAQIEMNKK 1168

  Fly    96 RDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYEL 160
            |:||..|||:.||:..|:.|.|...|:||..:.:.:..||::.|.:.|.:.||:|::.:.|:.::
Zfish  1169 REAEFQKLRRDLEEATLQHEATAATLRKKQADSVAELGEQIDNLQRVKQKLEKEKSELRLELDDV 1233

  Fly   161 LSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKV 225
            :|.:|...|.|...||....||..::|...|.||..|.:.|.:..:|:|..||.||::.:::...
Zfish  1234 VSNMEHVVKTKANLEKMTRSLEDQMNEYKTKYEEGQRCINDFTMQKSKLQSENGELSRQLEEKDS 1298

  Fly   226 QLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQL 290
            .:..::.||.....|:||.:|:||:|.:.:|.|..::.....:.|.:|.|.|||.||:.:|:|.:
Zfish  1299 LVSQLTRSKMSYTQQIEDLKRQLEEETKAKSALAHAVQSARHDTDLLREQYEEEQEAKAELQRGM 1363

  Fly   291 VKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVE 355
            .|||::...|:.|:.::...|.||:||.::|...|:.|.||.:|::..|.::|||.|.||.:|:|
Zfish  1364 SKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQETEEAVEAVNAKCSSLEKTKHRLQNEIE 1428

  Fly   356 VLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKV 420
            .|::|||:||.:...|.|.....:|...|.|.:.:|:....|:||::.:....:|.:..:..::.
Zfish  1429 DLMVDLERSNAAAAALDKKQRNFDKVLSEWKQKFEESQAELESSQKEARCLSTELFKLKNSYEEA 1493

  Fly   421 KDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQ 485
            .|:...:.||||.|.:::.:....:.|..:.:||||...::||.|:.|:.:|.:||||..:.||.
Zfish  1494 LDHLETMKRENKNLQEEISDLTEQLGEGGKSIHELEKMRKQLEQEKSEIQSALEEAEASLEHEEG 1558

  Fly   486 RGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQI 550
            :..|...:|:|.:.|.||:|||||||:|..::.....|:.|.:. :|:|||.:.|..|||||::.
Zfish  1559 KILRAQLEFSQIKADIERKLAEKDEEMEQSKRNLQRTIDTLQSS-LESETRSRNEALRIKKKMEG 1622

  Fly   551 QITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATL-------DQYAVAQRRL 608
            .:.|:|:.|..||:...:.||       ||..:.||.:|.|.||..:|       :..|:.:||.
Zfish  1623 DLNEMEIQLSQANRQAAEAQK-------QLKSVHAHMKDAQLQLDDSLRTNEDLKENTAIVERRN 1680

  Fly   609 AGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEE 673
            ..|..||||:|:.|:...|.::..|.:..:.:.|:..|.:.|.||::.|.|||.::|.:.::.||
Zfish  1681 NLLQAELEELRAALEQTERGRKLAEQELLDTSERVQLLHSQNTSLLNQKKKLETDISQLQTEVEE 1745

  Fly   674 VSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGS 738
            ..:|.|.::|:.:|...:...:.|::.:||:....||.:||::|..:|:|..||:|.|..|:.|.
Zfish  1746 AVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIAMKGG 1810

  Fly   739 KRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTA 803
            |:.:.|||||:|:||.|:|.|:::.:|.:|.:||.||.:||:..|.|||:|||..|||.:||...
Zfish  1811 KKQVQKLEARVRELESEVESEQKKSSEAVKGIRKYERRIKELTYQTEEDRKNLARLQDLVDKLQL 1875

  Fly   804 KINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            |:..|:|...|.|..:....::.|:.|.||:.||:|||.|||.:|.:|||.|
Zfish  1876 KVKAYKRAAEEAEEQANTNLSKFRKIQHELDEAEERADIAESQVNKLRAKSR 1927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 288/825 (35%)
myh7NP_001106204.1 Myosin_N 35..72 CDD:280832
Myosin_head 87..768 CDD:278492
MYSc_class_II 99..768 CDD:276951
MIT_CorA-like 780..>991 CDD:294313
Myosin_tail_1 848..1925 CDD:279860 290/828 (35%)
RILP-like 963..1096 CDD:304877
MIT_CorA-like <1297..>1409 CDD:294313 37/111 (33%)
COG6 1374..>1536 CDD:303003 48/161 (30%)
GBP_C 1563..1825 CDD:303769 92/269 (34%)
TMPIT 1742..>1832 CDD:285135 33/89 (37%)
coiled coil 1795..1805 CDD:293879 5/9 (56%)
coiled coil 1814..1825 CDD:293879 6/10 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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