DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and unc-54

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_493596.1 Gene:unc-54 / 259839 WormBaseID:WBGene00006789 Length:1963 Species:Caenorhabditis elegans


Alignment Length:847 Identity:291/847 - (34%)
Similarity:491/847 - (57%) Gaps:20/847 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SRLED-----------------KIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGG 85
            |||||                 :|..|:::||.||:.|.:.:|.|:||..::.::.|:|:|..|.
 Worm  1101 SRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGA 1165

  Fly    86 AEHQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDK 150
            ...|.|.|:||:|||.|||:.||:.::..|.....|:|||.:.:.:..:|::.|.|.||:.||||
 Worm  1166 TAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDK 1230

  Fly   151 AKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIE 215
            |:...:..:|.:|::.....|:.:||...:.|:.::||..|.:|.:|.:.|.:|.:.||..||.:
 Worm  1231 AQAVRDAEDLAAQLDQETSGKLNNEKLAKQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGD 1295

  Fly   216 LTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEES 280
            |.:.::|.:.|::.::..|||:.||||:|||..::|.|.|..:.:.....:.|.:.::..||||.
 Worm  1296 LVRQLEDAESQVNQLTRLKSQLTSQLEEARRTADEEARERQTVAAQAKNYQHEAEQLQESLEEEI 1360

  Fly   281 EARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEK 345
            |.:.::.|||.|||||...|:.::..|...:|:|:|:.:|:...:|.||:|.:::...|..:|||
 Worm  1361 EGKNEILRQLSKANADIQQWKARFEGEGLLKADELEDAKRRQAQKINELQEALDAANSKNASLEK 1425

  Fly   346 MKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADL 410
            .|:||..:::...:|:|::|.....|.|.....:|...|.:.:.|:.....:.:||||:|...||
 Worm  1426 TKSRLVGDLDDAQVDVERANGVASALEKKQKGFDKIIDEWRKKTDDLAAELDGAQRDLRNTSTDL 1490

  Fly   411 VRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKE 475
            .:..:..:::.:....|.||||.|..::.:....:.|..|.:||::..:||||.|::||..|..|
 Worm  1491 FKAKNAQEELAEVVEGLRRENKSLSQEIKDLTDQLGEGGRSVHEMQKIIRRLEIEKEELQHALDE 1555

  Fly   476 AEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTE 540
            |||..:|||.:..|...:.:|.|.:.|:|:.||:||.|..||..:..:|.:.|. :|.|.:.|.|
 Worm  1556 AEAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFENTRKNHARALESMQAS-LETEAKGKAE 1619

  Fly   541 VTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQ 605
            :.||||||:..|.|||::||.|||.|.|.||.:|:...|:.|||...|:.||....|.:|:..|:
 Worm  1620 LLRIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRNGADTREQFFNAE 1684

  Fly   606 RRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASD 670
            :|...|..|.||:....::|.||::..|.:..:|..:.||......||.|.|.|||.|:..:.:|
 Worm  1685 KRATLLQSEKEELLVANEAAERARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHAD 1749

  Fly   671 YEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAV 735
            .:|...|.:.::||.:|...:...:.|::.:|||....::.::|.||.::|.:.:||:|.|..|:
 Worm  1750 LDETLNEYKAAEERSKKAIADATRLAEELRQEQEHSQHVDRLRKGLEQQLKEIQVRLDEAEAAAL 1814

  Fly   736 AGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDK 800
            .|.|::|:|||.|:|:||.||:.|:||..:..|.|.:.:|.|:|:..|.:||:||...|||.:||
 Worm  1815 KGGKKVIAKLEQRVRELESELDGEQRRFQDANKNLGRADRRVRELQFQVDEDKKNFERLQDLIDK 1879

  Fly   801 STAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHRTFVTTSTVPG 865
            ...|:...::|:.|.|.::.....:.::...:||.||:|||.||:||:.:|:|.|  .:.|..||
 Worm  1880 LQQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEERADQAENSLSKMRSKSR--ASASVAPG 1942

  Fly   866 SQ 867
            .|
 Worm  1943 LQ 1944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 285/831 (34%)
unc-54NP_493596.1 Myosin_N 28..72 CDD:460670
MYSc_class_II 95..775 CDD:276951
Myosin_tail_1 853..1932 CDD:460256 285/831 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.