DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myp2

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_593816.1 Gene:myp2 / 2543576 PomBaseID:SPAC4A8.05c Length:2104 Species:Schizosaccharomyces pombe


Alignment Length:1069 Identity:206/1069 - (19%)
Similarity:410/1069 - (38%) Gaps:300/1069 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TGPGTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAE 83
            :||..:|.|| |....::||.|:|           .:||:....:|...||.::.::||.||::.
pombe  1101 SGPLNSDENI-YSTSSTTLSILKD-----------VQELKSLHTKEANQLSERIKEISEMLEQSI 1153

  Fly    84 GGAEHQFEANRKRDAELLKLRKLLEDVHLESEETTLL---------------------------- 120
            ...|..    |::::||..:.:.|: ..::.:||.::                            
pombe  1154 ATEEKL----RRKNSELCDIIEALK-YQIQDQETEIISLNADNLDLKDTNGVLEKNASDFIDFQG 1213

  Fly   121 LKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYEL----------------------LSQ 163
            :|.::...|:|...|::     |.|.:....|.:||...:                      |.:
pombe  1214 IKSRYEHKISDLLNQLQ-----KERCKVGLLKQKTENRSVTQHTLDGNSPHPSFEEKHSGDPLKR 1273

  Fly   164 IESYNKEKIVSEKHISKLEVSISELNVKIEE-------LNR--TVIDISSH-------------- 205
            |:..|.::.:..|.:..:..|:..|.:.:||       |::  :..|||.|              
pombe  1274 IDGNNDDRKIDNKLLKTISKSLDALQLTVEEELSNLYSLSKDLSFTDISGHIPNSIRKLEKGLST 1338

  Fly   206 ----RSRLSQENI-----ELTKDVQDL----KVQLDTVSFSKSQVISQLE--------------- 242
                :.||:..|.     ::.||.|.:    |:..:..|.::|.:||.|:               
pombe  1339 LSELKERLNASNSDRPSPDIFKDTQAIMNSRKLLSNPNSDAQSGLISSLQKKLYNPESNMEFTGL 1403

  Fly   243 ---------------------------------DARRRLEDE---DRRRSLLESSLHQVEIELDS 271
                                             |....:.|.   ::|.|:|::...::.::|..
pombe  1404 KPLSPSKISNLPSSQPGSPSKRSGKMEALIRNFDQNSSIPDPFIVNQRNSVLQTEFEKINLKLKE 1468

  Fly   272 VRNQ--LEEESEARI-DLERQLVKANADATSWQNKWNS---------EVAARAEEVEEIRRKYQV 324
            ....  |:.:..::. :|.:.|:|.|.:.   :|...|         :.|...|:|....|    
pombe  1469 ATKSGILDNKDLSKFSELIQSLLKENEEL---KNLTTSNLGSDDKMLDFAPLLEDVPNNTR---- 1526

  Fly   325 RITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVE----- 384
                  ..|:..:.|..:.::...:|.|..|..:...||   :.||:||..:.| .|.::     
pombe  1527 ------NQIKGFVEKAISSKRAIAKLYSASEEKLFSTEK---ALREITKERDRL-LHGLQGPSVP 1581

  Fly   385 ---LKS---------RLDETIILY------ETSQRDLK-NKHADLVRTVHELDKVKDNNNQLTRE 430
               ||:         ..|.:|..|      |..|.::. .|..:|..||   :|.::....:...
pombe  1582 TSPLKAPTASQLIIPNFDGSITNYSGEEETEWLQEEVNIMKIKELTSTV---NKYREQLAMVQSL 1643

  Fly   431 NKKLGDDLHEAKGAINELNRRLHELELELRR--------LENERDELTAAYKEAEA--GRKAEEQ 485
            |:.....|.:|:.:.|.|..||.|:| ||.|        |:||..:.....||.|.  ..|:.:.
pombe  1644 NEHAESSLSKAERSKNYLTGRLQEVE-ELARGFQTTNADLQNELADAVVKQKEYEVLYVEKSNDY 1707

  Fly   486 -----RGQRLAADFNQYR----HDAERRLAEKDE--------EIEAIRKQTSIEIEQLNARVIEA 533
                 :.::|....:::.    .|.|.| .:||:        |:...:.|...|.|: |.|:.:.
pombe  1708 NTLLLQKEKLMKQIDEFHVIRVQDLEER-EKKDQLLFQRYQKELNGFKVQLEEEREK-NLRIRQD 1770

  Fly   534 ETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATL 598
            ...:..|:..|:.|..    ||     |..|||:     :|:.|:    |||..:.:.|...::.
pombe  1771 NRHMHAEIGDIRTKFD----EL-----VLEKTNL-----LKENSI----LQADLQSLSRVNNSSS 1817

  Fly   599 DQYAVAQRRLAGLNGELEEV-------RSHLDSANRAKRTVELQYEEAASRINELTTANV----- 651
            .....||.:|..|..:|:||       |...|:..|..|.:|.:..|.:.::|:...::.     
pombe  1818 TAQQNAQSQLLSLTAQLQEVREANQTLRKDQDTLLRENRNLERKLHEVSEQLNKKFDSSARPFDE 1882

  Fly   652 -----SLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLET 711
                 .::::||.|.|:..:::|..|.: |::.:...:.||.....:....|:|.:   :..|:.
pombe  1883 IEMEKEVLTLKSNLAQKDDLLSSLVERI-KQIEMFALKTQKDSNNHREENLQLHRQ---LGVLQK 1943

  Fly   712 IKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERT 776
            .||.||:::.:|.::...:      .:.:.:..|:.:|.|||...........:.|...|.::||
pombe  1944 EKKDLELKLFDLDLKTYPI------STSKDVRMLQKQISDLEASFAASDIERIKGIDECRNRDRT 2002

  Fly   777 VKEVLVQC---EEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAED 838
            ::::..|.   ::|:|.:......|::..|::   |.||.:.:....|....:||.:..|:...:
pombe  2003 IRQLEAQISKFDDDKKRIQSSVSRLEERNAQL---RNQLEDVQASETQWKFALRRTEHALQEERE 2064

  Fly   839 RADTAESSLNIIRAKHRTFVTTSTVPGSQ 867
            |..:.|:..:    |:|:.:....|..|:
pombe  2065 RVKSLETDFD----KYRSLLEGQRVKRSE 2089

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 196/1038 (19%)
myp2NP_593816.1 COG5022 17..1607 CDD:227355 95/544 (17%)
Myosin_N 38..76 CDD:280832
MYSc_class_II 103..755 CDD:276951
Tup_N 1684..1759 CDD:285748 14/75 (19%)
RILP-like <1997..2072 CDD:304877 17/77 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.